RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
NR1I3-209ENST00000428574 ENAHQ8N8S7 591 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-209ENST00000428574 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
NR1I3-209ENST00000428574 NSUN7Q8NE18 718 aaKnown RBP10.61□□□□□ -0.71
NR1I3-209ENST00000428574 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
NR1I3-209ENST00000428574 MXD3Q9BW11 206 aa10.61□□□□□ -0.71
NR1I3-209ENST00000428574 LRRC2Q9BYS8 371 aa10.61□□□□□ -0.71
NR1I3-209ENST00000428574 DDX4Q9NQI0 724 aaKnown RBP10.61□□□□□ -0.71
NR1I3-209ENST00000428574 RBM28Q9NW13 759 aaKnown RBP10.61□□□□□ -0.71
NR1I3-209ENST00000428574 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
NR1I3-209ENST00000428574 PI4KBQ9UBF8 816 aa10.61□□□□□ -0.71
NR1I3-209ENST00000428574 HERC5Q9UII4 1024 aaKnown RBP10.61□□□□□ -0.71
NR1I3-209ENST00000428574 BRPF3Q9ULD4 1205 aa10.61□□□□□ -0.71
NR1I3-209ENST00000428574 CYP2D7A0A087X1C5 515 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 PTPDC1A2A3K4 754 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 CPLX1O14810 134 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 STX6O43752 255 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 TSPY3P0CV98 308 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 TSPY8P0CW00 308 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 CYP2D6P10635 497 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 IFNAR1P17181 557 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 PLCD1P51178 756 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 RBM5P52756 815 aaKnown RBP eCLIP10.6□□□□□ -0.71
NR1I3-209ENST00000428574 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
NR1I3-209ENST00000428574 CHST3Q7LGC8 479 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 CATIPQ7Z7H3 387 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 ZNF654Q8IZM8 581 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 GPC2Q8N158 579 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 FAM151AQ8WW52 585 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 WASF1Q92558 559 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 SYT17Q9BSW7 474 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 MYH1P12882 1939 aa10.6□□□□□ -0.71
NR1I3-209ENST00000428574 DICER1Q9UPY3 1922 aaKnown RBP10.6□□□□□ -0.71
NR1I3-209ENST00000428574 GOLGA8AA7E2F4 631 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 GOLGA6L22H0YM25 854 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 ZSCAN22P10073 491 aaPredicted RBP10.59□□□□□ -0.71
NR1I3-209ENST00000428574 SYT1P21579 422 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 KIF5BP33176 963 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 TNNI2P48788 182 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 TFAP4Q01664 338 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 TROAPQ12815 778 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 NECAB1Q8N987 351 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
NR1I3-209ENST00000428574 MYOZ2Q9NPC6 264 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 ADAMTSL1Q8N6G6 1762 aa10.59□□□□□ -0.71
NR1I3-209ENST00000428574 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 TBC1D12O60347 775 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 CTDNEP1O95476 244 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 GNAQP50148 359 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 RASSF7Q02833 373 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 NFIAQ12857 509 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 STK3Q13188 491 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 PICALMQ13492 652 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 RTN1Q16799 776 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
NR1I3-209ENST00000428574 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 RCSD1Q6JBY9 416 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 TATDN1Q6P1N9 297 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 TRIM22Q8IYM9 498 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 FANCBQ8NB91 859 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 HOOK2Q96ED9 719 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-209ENST00000428574 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-209ENST00000428574 ZSCAN16Q9H4T2 348 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-209ENST00000428574 KAT14Q9H8E8 782 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
NR1I3-209ENST00000428574 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-209ENST00000428574 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
NR1I3-209ENST00000428574 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-209ENST00000428574 WNT10BO00744 389 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 PRDM1O75626 825 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 TOP1P11387 765 aaKnown RBP10.57□□□□□ -0.72
NR1I3-209ENST00000428574 MAP3K10Q02779 954 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 NTRK3Q16288 839 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 CTCFLQ8NI51 663 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-209ENST00000428574 DYNLL2Q96FJ2 89 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
NR1I3-209ENST00000428574 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 TDRD3Q9H7E2 651 aaKnown RBP10.57□□□□□ -0.72
NR1I3-209ENST00000428574 INCENPQ9NQS7 918 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-209ENST00000428574 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 PPP2R3BQ9Y5P8 575 aa10.57□□□□□ -0.72
NR1I3-209ENST00000428574 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 ABCB7O75027 752 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 DEXIO95424 95 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-209ENST00000428574 F13A1P00488 732 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 MCM4P33991 863 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 SHMT1P34896 483 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 GMPSP49915 693 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-209ENST00000428574 PRELPP51888 382 aa10.56□□□□□ -0.72
NR1I3-209ENST00000428574 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms