RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
HDLBP-216ENST00000428482 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
HDLBP-216ENST00000428482 METTL16Q86W50 562 aaKnown RBP12.37□□□□□ -0.43
HDLBP-216ENST00000428482 CRACR2BQ8N4Y2 399 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-216ENST00000428482 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
HDLBP-216ENST00000428482 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
HDLBP-216ENST00000428482 TRIM17Q9Y577 477 aa12.37□□□□□ -0.43
HDLBP-216ENST00000428482 CCDC85CA6NKD9 419 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 FOXP2O15409 715 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
HDLBP-216ENST00000428482 GH2P01242 217 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 HLA-DOAP06340 250 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
HDLBP-216ENST00000428482 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 KBTBD3Q8NAB2 608 aa12.36□□□□□ -0.43
HDLBP-216ENST00000428482 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
HDLBP-216ENST00000428482 HERC5Q9UII4 1024 aaKnown RBP12.36□□□□□ -0.43
HDLBP-216ENST00000428482 ALDH1A1P00352 501 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 GABPAQ06546 454 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 SPP2Q13103 211 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 MCM9Q9NXL9 1143 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 PI4KBQ9UBF8 816 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 TTC41PQ6P2S7 1318 aa12.35□□□□□ -0.43
HDLBP-216ENST00000428482 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 GPAA1O43292 621 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 AKR1B1P15121 316 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
HDLBP-216ENST00000428482 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 ACER1Q8TDN7 264 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 EHD4Q9H223 541 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
HDLBP-216ENST00000428482 ZFYVE28Q9HCC9 887 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 SERPINB13Q9UIV8 391 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
HDLBP-216ENST00000428482 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 TLR2O60603 784 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-216ENST00000428482 BCRP11274 1271 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 PDE4AP27815 886 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 INHBEP58166 350 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 SP3Q02447 781 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 TATDN1Q6P1N9 297 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 APPBP2Q92624 585 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 PARK7Q99497 189 aaKnown RBP12.33□□□□□ -0.44
HDLBP-216ENST00000428482 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.444e-7■□□□□ 9.9
HDLBP-216ENST00000428482 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
HDLBP-216ENST00000428482 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 CXCL11O14625 94 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 GLRX3O76003 335 aaKnown RBP12.32□□□□□ -0.44
HDLBP-216ENST00000428482 PDE1AP54750 535 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 LACTBP83111 547 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-216ENST00000428482 SEPT2Q15019 361 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 RAB3GAP1Q15042 981 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
HDLBP-216ENST00000428482 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 GSG1L2A8MUP6 293 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
HDLBP-216ENST00000428482 IGSF3O75054 1194 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 ASNSP08243 561 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 FBXO46Q6PJ61 603 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-216ENST00000428482 ZNF589Q86UQ0 364 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-216ENST00000428482 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 STRBPQ96SI9 672 aaKnown RBP12.31□□□□□ -0.44
HDLBP-216ENST00000428482 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
HDLBP-216ENST00000428482 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 ZNF236Q9UL36 1845 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 ALPK3Q96L96 1907 aa12.31□□□□□ -0.44
HDLBP-216ENST00000428482 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 USP17L21D6R901 530 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 MPHOSPH10O00566 681 aaKnown RBP12.3□□□□□ -0.44
HDLBP-216ENST00000428482 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-216ENST00000428482 PRKCZQ05513 592 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 ABCB5Q2M3G0 1257 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 CERKLQ49MI3 558 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-216ENST00000428482 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 ZMYM1Q5SVZ6 1142 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 C16orf86Q6ZW13 317 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 SH3TC2Q8TF17 1288 aa12.3□□□□□ -0.44
HDLBP-216ENST00000428482 FEZ1Q99689 392 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms