RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TATDN2Q93075 761 aa18.13■□□□□ 0.49
C9orf3-206ENST00000428313 SAR1BQ9Y6B6 198 aa18.13■□□□□ 0.49
C9orf3-206ENST00000428313 KIF28PB7ZC32 967 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 IFFO1Q0D2I5 559 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 PDCLQ13371 301 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 MORC3Q14149 939 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 LONRF3Q496Y0 759 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 IQCEQ6IPM2 695 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 CCDC70Q6NSX1 233 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 CTAGE1Q96RT6 745 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 BATF3Q9NR55 127 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 MYH8P13535 1937 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 ZMYM6O95789 1325 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 PI4KAP2A4QPH2 592 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 GNAT3A8MTJ3 354 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 TEX33O43247 280 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 PLCD1P51178 756 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 NBPF9Q3BBW0 867 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-206ENST00000428313 CYP26C1Q6V0L0 522 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 KDM7AQ6ZMT4 941 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 PI4KAP1Q8N8J0 262 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 GDAP1L1Q96MZ0 367 aa18.12■□□□□ 0.49
C9orf3-206ENST00000428313 SAMSN1Q9NSI8 373 aaKnown RBP18.12■□□□□ 0.49
C9orf3-206ENST00000428313 TOPAZ1Q8N9V7 1692 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 ABL1P00519 1130 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 PTPAQ15257 358 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 CEP57Q86XR8 500 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 ZNF473Q8WTR7 871 aaKnown RBP18.11■□□□□ 0.49
C9orf3-206ENST00000428313 ETAA1Q9NY74 926 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 KCNH3Q9ULD8 1083 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 HOXB7P09629 217 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 CASP14P31944 242 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 SARSP49591 514 aaKnown RBP18.11■□□□□ 0.49
C9orf3-206ENST00000428313 TTMPQ5BVD1 217 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 RNF187Q5TA31 235 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-206ENST00000428313 CYB5D1Q6P9G0 228 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 C6orf89Q6UWU4 347 aa18.11■□□□□ 0.49
C9orf3-206ENST00000428313 GSPT2Q8IYD1 628 aaKnown RBP18.11■□□□□ 0.49
C9orf3-206ENST00000428313 ADD3Q9UEY8 706 aaKnown RBP18.11■□□□□ 0.49
C9orf3-206ENST00000428313 SH3TC1Q8TE82 1336 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 SEMA3EO15041 775 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 ATP5JP18859 108 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 LSP1P33241 339 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 ERVK-24P63145 666 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 TAX1BP1Q86VP1 789 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 CPLX3Q8WVH0 158 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 CENPHQ9H3R5 247 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.1■□□□□ 0.49
C9orf3-206ENST00000428313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.1■□□□□ 0.49
C9orf3-206ENST00000428313 GYPCP04921 128 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 POSTNQ15063 836 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 FILIP1LQ4L180 1135 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 CCDC129Q6ZRS4 1044 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 SND1Q7KZF4 910 aaKnown RBP eCLIP18.1■□□□□ 0.49
C9orf3-206ENST00000428313 FAM228AQ86W67 206 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 TRMT44Q8IYL2 757 aaKnown RBP18.1■□□□□ 0.49
C9orf3-206ENST00000428313 RUFY1Q96T51 708 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 DSCC1Q9BVC3 393 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 HAUS4Q9H6D7 363 aa18.1■□□□□ 0.49
C9orf3-206ENST00000428313 PPFIA3O75145 1194 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 CLSTN1O94985 981 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 TMED8Q6PL24 325 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-206ENST00000428313 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 FUKQ8N0W3 1084 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 HOOK2Q96ED9 719 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 MED15Q96RN5 788 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 APBA1Q02410 837 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 TRIM14Q14142 442 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 KIAA1328Q86T90 577 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 EHBP1Q8NDI1 1231 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 ITFG2Q969R8 447 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 RSRC1Q96IZ7 334 aaKnown RBP18.09■□□□□ 0.49
C9orf3-206ENST00000428313 CALR3Q96L12 384 aaKnown RBP18.09■□□□□ 0.49
C9orf3-206ENST00000428313 CCDC114Q96M63 670 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 ABHD10Q9NUJ1 306 aa18.09■□□□□ 0.49
C9orf3-206ENST00000428313 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-206ENST00000428313 IGSF1Q8N6C5 1336 aa18.08■□□□□ 0.49
C9orf3-206ENST00000428313 E7EWF7 191 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 HSF2BPO75031 334 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 ZMYND10O75800 440 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 PDHBP11177 359 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 RWDD2BP57060 319 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 NAA25Q14CX7 972 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 PTGISQ16647 500 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 SLC9C2Q5TAH2 1124 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 SPATA1Q5VX52 437 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 EMBQ6PCB8 327 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 ZNF662Q6ZS27 426 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 MMGT1Q8N4V1 131 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 C3orf20Q8ND61 904 aa18.08■□□□□ 0.48
C9orf3-206ENST00000428313 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 ATP1A1P05023 1023 aaKnown RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 GCKP35557 465 aa18.07■□□□□ 0.48
C9orf3-206ENST00000428313 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 HDGFP51858 240 aaKnown RBP18.07■□□□□ 0.48
C9orf3-206ENST00000428313 EPHB4P54760 987 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms