RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 STX17P56962 302 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 ICA1Q05084 483 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 SNX29Q8TEQ0 813 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 JAKMIP2Q96AA8 810 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 ANAPC4Q9UJX5 808 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 GPAA1O43292 621 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 SPOPO43791 374 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 SERPINB2P05120 415 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 HOXB7P09629 217 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 PPP2R5DQ14738 602 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 Q3C1V9 767 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 CNNM4Q6P4Q7 775 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 STMN4Q9H169 189 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 MAGI2Q86UL8 1455 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 POLR2MP0CAP2 368 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 ERCC5P28715 1186 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 ZBTB16Q05516 673 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 C8orf34Q49A92 452 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 TMX3Q96JJ7 454 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 NUB1Q9Y5A7 615 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 EXOC3O60645 756 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 TNNI1P19237 187 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 BCAMP50895 628 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 CTSWP56202 376 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 NUCB1Q02818 461 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 DCUN1D2Q6PH85 259 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 IPO4Q8TEX9 1081 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 LGR6Q9HBX8 967 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 LRWD1Q9UFC0 647 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 AFG3L2Q9Y4W6 797 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 TYW5A2RUC4 315 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 UIMC1Q96RL1 719 aa11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 ZHX1Q9UKY1 873 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-202ENST00000427926 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.63
CLTCL1-202ENST00000427926 SNW1Q13573 536 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 FAM102BQ5T8I3 360 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 TPH2Q8IWU9 490 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 ZNF496Q96IT1 587 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 DBNDD2Q9BQY9 259 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 CAPN9O14815 690 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 XPAP23025 273 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 NRBP2Q9NSY0 501 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 COL17A1Q9UMD9 1497 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 CETN3O15182 167 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 KRT86O43790 486 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 KCNA4P22459 653 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 CALCRLQ16602 461 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 SMC6Q96SB8 1091 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 CALCOCO2Q13137 446 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 SND1Q7KZF4 910 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 TIGD1Q96MW7 591 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
CLTCL1-202ENST00000427926 ZSCAN20P17040 1043 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ARID4AP29374 1257 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ALDH3A1P30838 453 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 RILPL1Q5EBL4 403 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 PIM2Q9P1W9 311 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 BTDP43251 543 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 MMS19Q96T76 1030 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ESYT2A0FGR8 921 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 GCNT3O95395 438 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 TNNC2P02585 160 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 VWA3BQ502W6 1294 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 CRKLP46109 303 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 KIF11P52732 1056 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 TPD52P55327 224 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 HERC4Q5GLZ8 1057 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 CIAPIN1Q6FI81 312 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 RTKN2Q8IZC4 609 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 RETREG2Q8NC44 543 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 KLHDC4Q8TBB5 520 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 CSRNP1Q96S65 589 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 APOL6Q9BWW8 343 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 MRPL44Q9H9J2 332 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 XDHP47989 1333 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 RAD17O75943 681 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ZNF569Q5MCW4 686 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 REXO1Q8N1G1 1221 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 TTLL6Q8N841 843 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 NSRP1Q9H0G5 558 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 MTRF1LQ9UGC7 380 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
CLTCL1-202ENST00000427926 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 SAMD9Q5K651 1589 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 CEP85Q6P2H3 762 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 CCDC25Q86WR0 208 aa11.06□□□□□ -0.64
CLTCL1-202ENST00000427926 CLSTN2Q9H4D0 955 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms