RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 SMIM22K7EJ46 135 aa23.17■■□□□ 1.3
COL9A2-204ENST00000427563 SHMT1P34896 483 aa23.17■■□□□ 1.3
COL9A2-204ENST00000427563 HMGCS2P54868 508 aa23.17■■□□□ 1.3
COL9A2-204ENST00000427563 SH3D19Q5HYK7 790 aa23.17■■□□□ 1.3
COL9A2-204ENST00000427563 PI4K2BQ8TCG2 481 aa23.17■■□□□ 1.3
COL9A2-204ENST00000427563 PUS7LQ9H0K6 701 aaKnown RBP23.17■■□□□ 1.3
COL9A2-204ENST00000427563 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
COL9A2-204ENST00000427563 ECM2O94769 699 aaPredicted RBP23.16■■□□□ 1.3
COL9A2-204ENST00000427563 ASNSP08243 561 aa23.16■■□□□ 1.3
COL9A2-204ENST00000427563 HDAC1Q13547 482 aaPredicted RBP23.16■■□□□ 1.3
COL9A2-204ENST00000427563 PARK7Q99497 189 aaKnown RBP23.16■■□□□ 1.3
COL9A2-204ENST00000427563 TBC1D2Q9BYX2 928 aa23.16■■□□□ 1.3
COL9A2-204ENST00000427563 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.16■■□□□ 1.3
COL9A2-204ENST00000427563 BRCA2P51587 3418 aa23.15■■□□□ 1.3
COL9A2-204ENST00000427563 GH2P01242 217 aa23.15■■□□□ 1.3
COL9A2-204ENST00000427563 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
COL9A2-204ENST00000427563 KBTBD3Q8NAB2 608 aa23.15■■□□□ 1.3
COL9A2-204ENST00000427563 PROCA1Q8NCQ7 364 aaPredicted RBP23.15■■□□□ 1.3
COL9A2-204ENST00000427563 TRIM34Q9BYJ4 488 aa23.15■■□□□ 1.3
COL9A2-204ENST00000427563 MCM9Q9NXL9 1143 aa23.15■■□□□ 1.3
COL9A2-204ENST00000427563 MYH8P13535 1937 aa23.14■■□□□ 1.3
COL9A2-204ENST00000427563 GUCY1A2P33402 732 aa23.14■■□□□ 1.29
COL9A2-204ENST00000427563 MTMR2Q13614 643 aa23.14■■□□□ 1.29
COL9A2-204ENST00000427563 EXOC6Q8TAG9 804 aa23.14■■□□□ 1.29
COL9A2-204ENST00000427563 TRIM47Q96LD4 638 aa23.14■■□□□ 1.29
COL9A2-204ENST00000427563 GINM1Q9NU53 330 aa23.14■■□□□ 1.29
COL9A2-204ENST00000427563 PTCH2Q9Y6C5 1203 aa23.14■■□□□ 1.29
COL9A2-204ENST00000427563 TTC41PQ6P2S7 1318 aa23.13■■□□□ 1.29
COL9A2-204ENST00000427563 POLR3DP05423 398 aaPredicted RBP23.13■■□□□ 1.29
COL9A2-204ENST00000427563 BACE1P56817 501 aa23.13■■□□□ 1.29
COL9A2-204ENST00000427563 SLC44A5Q8NCS7 719 aa23.13■■□□□ 1.29
COL9A2-204ENST00000427563 AS3MTQ9HBK9 375 aa23.13■■□□□ 1.29
COL9A2-204ENST00000427563 CYP2D7A0A087X1C5 515 aa23.12■■□□□ 1.29
COL9A2-204ENST00000427563 DOCK3Q8IZD9 2030 aa23.12■■□□□ 1.29
COL9A2-204ENST00000427563 OSBP2Q969R2 916 aa23.12■■□□□ 1.29
COL9A2-204ENST00000427563 GPATCH3Q96I76 525 aa23.12■■□□□ 1.29
COL9A2-204ENST00000427563 TNRC18O15417 2968 aaPredicted RBP23.11■■□□□ 1.29
COL9A2-204ENST00000427563 PSMC4P43686 418 aa23.11■■□□□ 1.29
COL9A2-204ENST00000427563 CERKLQ49MI3 558 aaPredicted RBP23.11■■□□□ 1.29
COL9A2-204ENST00000427563 ANKRD45Q5TZF3 282 aa23.11■■□□□ 1.29
COL9A2-204ENST00000427563 DYNLL2Q96FJ2 89 aa23.11■■□□□ 1.29
COL9A2-204ENST00000427563 ATP8A2Q9NTI2 1148 aa23.11■■□□□ 1.29
COL9A2-204ENST00000427563 RBBP6Q7Z6E9 1792 aaKnown RBP23.11■■□□□ 1.29
COL9A2-204ENST00000427563 ZSCAN25Q6NSZ9 544 aa23.1■■□□□ 1.29
COL9A2-204ENST00000427563 ARMC5Q96C12 935 aa23.1■■□□□ 1.29
COL9A2-204ENST00000427563 STRBPQ96SI9 672 aaKnown RBP23.1■■□□□ 1.29
COL9A2-204ENST00000427563 EMILIN3Q9NT22 766 aa23.1■■□□□ 1.29
COL9A2-204ENST00000427563 SUPT16HQ9Y5B9 1047 aaKnown RBP23.1■■□□□ 1.29
COL9A2-204ENST00000427563 IGHDP01880 384 aa23.09■■□□□ 1.29
COL9A2-204ENST00000427563 MX1P20591 662 aa23.09■■□□□ 1.29
COL9A2-204ENST00000427563 OSBPP22059 807 aa23.09■■□□□ 1.29
COL9A2-204ENST00000427563 ABCB5Q2M3G0 1257 aa23.09■■□□□ 1.29
COL9A2-204ENST00000427563 ACER1Q8TDN7 264 aa23.09■■□□□ 1.29
COL9A2-204ENST00000427563 GCC1Q96CN9 775 aa23.09■■□□□ 1.29
COL9A2-204ENST00000427563 ASCC2Q9H1I8 757 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-204ENST00000427563 SLC4A4Q9Y6R1 1079 aa23.09■■□□□ 1.29
COL9A2-204ENST00000427563 USP17L10C9JJH3 530 aa23.08■■□□□ 1.29
COL9A2-204ENST00000427563 M0R2C6 588 aa23.08■■□□□ 1.29
COL9A2-204ENST00000427563 RNF113AO15541 343 aaKnown RBP23.08■■□□□ 1.29
COL9A2-204ENST00000427563 GLRX3O76003 335 aaKnown RBP23.08■■□□□ 1.29
COL9A2-204ENST00000427563 KIF22Q14807 665 aa23.08■■□□□ 1.29
COL9A2-204ENST00000427563 C12orf60Q5U649 245 aa23.08■■□□□ 1.29
COL9A2-204ENST00000427563 POTEEQ6S8J3 1075 aa23.08■■□□□ 1.29
COL9A2-204ENST00000427563 APPBP2Q92624 585 aa23.08■■□□□ 1.29
COL9A2-204ENST00000427563 GSG1L2A8MUP6 293 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 C19orf81C9J6K1 198 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 USP17L12C9JPN9 530 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 USP17L21D6R901 530 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 ARHGEF6Q15052 776 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 CTR9Q6PD62 1173 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 ANKRD13CQ8N6S4 541 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 SRRDQ9UH36 339 aa23.07■■□□□ 1.28
COL9A2-204ENST00000427563 POTEFA5A3E0 1075 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 PEX10O60683 326 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 GNRH1P01148 92 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 HOXA7P31268 230 aaPredicted RBP23.06■■□□□ 1.28
COL9A2-204ENST00000427563 AAMPQ13685 434 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 SEPT2Q15019 361 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 RAB3GAP1Q15042 981 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 SMC5Q8IY18 1101 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 SMCR8Q8TEV9 937 aaPredicted RBP23.06■■□□□ 1.28
COL9A2-204ENST00000427563 ZNF333Q96JL9 665 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 SEC62Q99442 399 aaKnown RBP23.06■■□□□ 1.28
COL9A2-204ENST00000427563 STAP2Q9UGK3 403 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 PNMA3Q9UL41 463 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 GABRQQ9UN88 632 aa23.06■■□□□ 1.28
COL9A2-204ENST00000427563 PLXNB2O15031 1838 aa23.05■■□□□ 1.28
COL9A2-204ENST00000427563 A0A1W2PRG0 241 aa23.05■■□□□ 1.28
COL9A2-204ENST00000427563 ERC2O15083 957 aa23.05■■□□□ 1.28
COL9A2-204ENST00000427563 FMNL1O95466 1100 aaPredicted RBP23.05■■□□□ 1.28
COL9A2-204ENST00000427563 MLLT1Q03111 559 aaPredicted RBP23.05■■□□□ 1.28
COL9A2-204ENST00000427563 SH3TC2Q8TF17 1288 aa23.05■■□□□ 1.28
COL9A2-204ENST00000427563 C12orf42Q96LP6 360 aa23.05■■□□□ 1.28
COL9A2-204ENST00000427563 P2RX7Q99572 595 aaKnown RBP23.05■■□□□ 1.28
COL9A2-204ENST00000427563 EPB41L4AQ9HCS5 686 aaPredicted RBP23.05■■□□□ 1.28
COL9A2-204ENST00000427563 TMOD4Q9NZQ9 345 aa23.05■■□□□ 1.28
COL9A2-204ENST00000427563 GREB1LQ9C091 1923 aaPredicted RBP23.05■■□□□ 1.28
COL9A2-204ENST00000427563 KIAA0100Q14667 2235 aaKnown RBP23.05■■□□□ 1.28
COL9A2-204ENST00000427563 GPAA1O43292 621 aa23.04■■□□□ 1.28
COL9A2-204ENST00000427563 AKR1B1P15121 316 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms