RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SYNE3Q6ZMZ3 975 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 PPFIBP1Q86W92 1011 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 VSTM4Q8IW00 320 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 RNF168Q8IYW5 571 aaPredicted RBP6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 ZNF513Q8N8E2 541 aaPredicted RBP6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 ANKS4BQ8N8V4 417 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 IGSF22Q8N9C0 903 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 OR8K1Q8NGG5 319 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 CFAP61Q8NHU2 1237 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 FAM81AQ8TBF8 368 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 RBM46Q8TBY0 533 aaKnown RBP6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 CAGE1Q8TC20 777 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 MICAL1Q8TDZ2 1067 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 NECTIN2Q92692 538 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 KCNB2Q92953 911 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 DHX58Q96C10 678 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 TBC1D31Q96DN5 1066 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 GDAP1L1Q96MZ0 367 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 PRAM1Q96QH2 718 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 TSC22D3Q99576 134 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 EPN3Q9H201 632 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 C1orf115Q9H7X2 142 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 ZNHIT6Q9NWK9 470 aaKnown RBP6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 NOP53Q9NZM5 478 aaKnown RBP6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 RCOR1Q9UKL0 485 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 FAM184BQ9ULE4 1060 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 PLCH2O75038 1416 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 KIF1BO60333 1816 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 MAP3K15Q6ZN16 1313 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 ABCC1P33527 1531 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 RCCD1A6NED2 376 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 ENO4A6NNW6 628 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 H7C1W4 665 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 PFKFB2O60825 505 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 GLRX3O76003 335 aaKnown RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 PRPF6O94906 941 aaKnown RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 YEATS4O95619 227 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 VIMP08670 466 aaKnown RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CNGA1P29973 690 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 FNTAP49354 379 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 PSMD7P51665 324 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 NAP1L1P55209 391 aaKnown RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 MRPS35P82673 323 aaKnown RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 ITIH3Q06033 890 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CUL3Q13618 768 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 LAMB3Q13751 1172 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 SPECC1Q5M775 1068 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 RNF187Q5TA31 235 aaPredicted RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 TTC19Q6DKK2 380 aaPredicted RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CYB5D1Q6P9G0 228 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 BLOC1S2Q6QNY1 142 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CWC27Q6UX04 472 aaKnown RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 C11orf57Q6ZUT1 292 aaPredicted RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 SESTD1Q86VW0 696 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CCDC13Q8IYE1 715 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 ELOA2Q8IYF1 753 aaPredicted RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 ARHGAP18Q8N392 663 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 KIFC2Q96AC6 838 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CCDC97Q96F63 343 aaPredicted RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 IRX2Q9BZI1 471 aaPredicted RBP6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 VCXQ9H320 206 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CENPHQ9H3R5 247 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 TMEM134Q9H6X4 195 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 ANKZF1Q9H8Y5 726 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CTNNAL1Q9UBT7 734 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 PALD1Q9ULE6 856 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 HPCAL4Q9UM19 191 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 VWDEQ8N2E2 1590 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 TCHHQ07283 1943 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 PNPLA6Q8IY17 1366 aa6.31□□□□□ -1.4
VTI1BP4-201ENST00000427516 KNDC1Q76NI1 1749 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 NEXMIFQ5QGS0 1516 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 LRRC7Q96NW7 1537 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 CAMSAP1Q5T5Y3 1602 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 ANO9A1A5B4 782 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 LRRD1A4D1F6 860 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 HMGB1P1B2RPK0 211 aaPredicted RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 E7ENQ6 273 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 CREB3O43889 395 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 CAND2O75155 1236 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 DNAJC8O75937 253 aaPredicted RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 FAM107AO95990 144 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 ME1P48163 572 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 PAPOLAP51003 745 aaKnown RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 EPHB4P54760 987 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 EMC10Q5UCC4 262 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 NUTM2DQ5VT03 806 aaPredicted RBP6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 NUGGCQ68CJ6 796 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 ADALQ6DHV7 355 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 KDM7AQ6ZMT4 941 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 SPATA21Q7Z572 469 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 ARHGAP22Q7Z5H3 698 aa6.3□□□□□ -1.4
VTI1BP4-201ENST00000427516 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms