RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ANGEL2Q5VTE6 544 aaKnown RBP9.07□□□□□ -0.96
C9orf3-205ENST00000427193 PCNX4Q63HM2 1172 aa9.07□□□□□ -0.96
C9orf3-205ENST00000427193 ELMO3Q96BJ8 720 aa9.07□□□□□ -0.96
C9orf3-205ENST00000427193 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
C9orf3-205ENST00000427193 PRG4Q92954 1404 aaPredicted RBP9.06□□□□□ -0.96
C9orf3-205ENST00000427193 CELA3AP09093 270 aa9.06□□□□□ -0.96
C9orf3-205ENST00000427193 USP17L7P0C7H9 530 aa9.06□□□□□ -0.96
C9orf3-205ENST00000427193 ADAMTS6Q9UKP5 1117 aa9.06□□□□□ -0.96
C9orf3-205ENST00000427193 BIVM-ERCC5R4GMW8 1640 aa9.05□□□□□ -0.96
C9orf3-205ENST00000427193 SV2BQ7L1I2 683 aa9.05□□□□□ -0.96
C9orf3-205ENST00000427193 UBE3DQ7Z6J8 389 aa9.05□□□□□ -0.96
C9orf3-205ENST00000427193 ZNF507Q8TCN5 953 aa9.05□□□□□ -0.96
C9orf3-205ENST00000427193 ASB11Q8WXH4 323 aa9.05□□□□□ -0.96
C9orf3-205ENST00000427193 P4HBP07237 508 aaKnown RBP9.04□□□□□ -0.96
C9orf3-205ENST00000427193 SLC23A3Q6PIS1 610 aa9.04□□□□□ -0.96
C9orf3-205ENST00000427193 GNAT3A8MTJ3 354 aa9.03□□□□□ -0.96
C9orf3-205ENST00000427193 PATL2C9JE40 543 aaKnown RBP9.03□□□□□ -0.96
C9orf3-205ENST00000427193 LRIG2O94898 1065 aa9.03□□□□□ -0.96
C9orf3-205ENST00000427193 LDHBP07195 334 aaKnown RBP9.03□□□□□ -0.96
C9orf3-205ENST00000427193 ARMCX6Q7L4S7 300 aa9.03□□□□□ -0.96
C9orf3-205ENST00000427193 SPACA3Q8IXA5 215 aa9.03□□□□□ -0.96
C9orf3-205ENST00000427193 LRRN4CLQ8ND94 238 aa9.03□□□□□ -0.96
C9orf3-205ENST00000427193 TTF2Q9UNY4 1162 aaKnown RBP9.03□□□□□ -0.96
C9orf3-205ENST00000427193 MAPK8IP1Q9UQF2 711 aa9.03□□□□□ -0.96
C9orf3-205ENST00000427193 CARMIL2Q6F5E8 1435 aa9.03□□□□□ -0.96
C9orf3-205ENST00000427193 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.96
C9orf3-205ENST00000427193 ABCA10Q8WWZ4 1543 aa9.02□□□□□ -0.97
C9orf3-205ENST00000427193 EOMESO95936 686 aa9.02□□□□□ -0.97
C9orf3-205ENST00000427193 C8AP07357 584 aa9.02□□□□□ -0.97
C9orf3-205ENST00000427193 CLCN7P51798 805 aa9.02□□□□□ -0.97
C9orf3-205ENST00000427193 FZD5Q13467 585 aa9.02□□□□□ -0.97
C9orf3-205ENST00000427193 LRFN4Q6PJG9 635 aa9.02□□□□□ -0.97
C9orf3-205ENST00000427193 HDXQ7Z353 690 aa9.02□□□□□ -0.97
C9orf3-205ENST00000427193 PRDM5Q9NQX1 630 aaPredicted RBP9.02□□□□□ -0.97
C9orf3-205ENST00000427193 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.02□□□□□ -0.97
C9orf3-205ENST00000427193 GNA15P30679 374 aa9.01□□□□□ -0.97
C9orf3-205ENST00000427193 INPP5AQ14642 412 aa9.01□□□□□ -0.97
C9orf3-205ENST00000427193 NKPD1Q17RQ9 610 aa9.01□□□□□ -0.97
C9orf3-205ENST00000427193 CYFIP1Q7L576 1253 aa9.01□□□□□ -0.97
C9orf3-205ENST00000427193 FAM168AQ92567 244 aa9.01□□□□□ -0.97
C9orf3-205ENST00000427193 FOXQ1Q9C009 403 aa9.01□□□□□ -0.97
C9orf3-205ENST00000427193 SNCAIPQ9Y6H5 919 aa9.01□□□□□ -0.97
C9orf3-205ENST00000427193 TSPOAP1O95153 1857 aa9□□□□□ -0.97
C9orf3-205ENST00000427193 PRAMEF27A3QJZ7 478 aa9□□□□□ -0.97
C9orf3-205ENST00000427193 FGD1P98174 961 aa9□□□□□ -0.97
C9orf3-205ENST00000427193 GAL3ST3Q96A11 431 aa9□□□□□ -0.97
C9orf3-205ENST00000427193 PLPPR2Q96GM1 343 aa9□□□□□ -0.97
C9orf3-205ENST00000427193 FHAD1B1AJZ9 1412 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 EIF4BP23588 611 aaKnown RBP8.99□□□□□ -0.97
C9orf3-205ENST00000427193 CAP2P40123 477 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 PTPN11Q06124 597 aaPredicted RBP8.99□□□□□ -0.97
C9orf3-205ENST00000427193 IKZF1Q13422 519 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 TTBK2Q6IQ55 1244 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 FLAD1Q8NFF5 587 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 TRAIPQ9BWF2 469 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 WNT10AQ9GZT5 417 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
C9orf3-205ENST00000427193 ADCY10Q96PN6 1610 aa8.98□□□□□ -0.97
C9orf3-205ENST00000427193 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
C9orf3-205ENST00000427193 SLITRK5O94991 958 aa8.98□□□□□ -0.97
C9orf3-205ENST00000427193 RPS26P62854 115 aaKnown RBP8.98□□□□□ -0.97
C9orf3-205ENST00000427193 ZP2Q05996 745 aa8.98□□□□□ -0.97
C9orf3-205ENST00000427193 C22orf34Q6ZV56 151 aa8.98□□□□□ -0.97
C9orf3-205ENST00000427193 MFSD2AQ8NA29 543 aa8.98□□□□□ -0.97
C9orf3-205ENST00000427193 FBRSQ9HAH7 460 aa8.98□□□□□ -0.97
C9orf3-205ENST00000427193 PITPNM2Q9BZ72 1349 aa8.98□□□□□ -0.97
C9orf3-205ENST00000427193 KRTAP4-8A0A0G2JLE6 195 aa8.97□□□□□ -0.97
C9orf3-205ENST00000427193 JAG1P78504 1218 aa8.97□□□□□ -0.97
C9orf3-205ENST00000427193 SLBPQ14493 270 aaKnown RBP eCLIP8.97□□□□□ -0.97
C9orf3-205ENST00000427193 WIPI1Q5MNZ9 446 aaPredicted RBP8.97□□□□□ -0.97
C9orf3-205ENST00000427193 LMCD1Q9NZU5 365 aa8.97□□□□□ -0.97
C9orf3-205ENST00000427193 ETF1P62495 437 aaKnown RBP8.96□□□□□ -0.98
C9orf3-205ENST00000427193 CCDC85BQ15834 202 aaPredicted RBP8.96□□□□□ -0.98
C9orf3-205ENST00000427193 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.96□□□□□ -0.98
C9orf3-205ENST00000427193 HID1Q8IV36 788 aa8.96□□□□□ -0.98
C9orf3-205ENST00000427193 PRDM7Q9NQW5 492 aa8.96□□□□□ -0.98
C9orf3-205ENST00000427193 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.98
C9orf3-205ENST00000427193 AK5Q9Y6K8 562 aa8.96□□□□□ -0.98
C9orf3-205ENST00000427193 DISP3Q9P2K9 1392 aa8.96□□□□□ -0.98
C9orf3-205ENST00000427193 FARP2O94887 1054 aaPredicted RBP8.95□□□□□ -0.98
C9orf3-205ENST00000427193 ZNF865P0CJ78 1059 aaPredicted RBP8.95□□□□□ -0.98
C9orf3-205ENST00000427193 LMNB1P20700 586 aa8.95□□□□□ -0.98
C9orf3-205ENST00000427193 SFRP5Q5T4F7 317 aa8.95□□□□□ -0.98
C9orf3-205ENST00000427193 ZNF746Q6NUN9 644 aaPredicted RBP8.95□□□□□ -0.98
C9orf3-205ENST00000427193 MIPEPQ99797 713 aa8.95□□□□□ -0.98
C9orf3-205ENST00000427193 TACC3Q9Y6A5 838 aa8.95□□□□□ -0.98
C9orf3-205ENST00000427193 ARID1BQ8NFD5 2236 aaPredicted RBP8.95□□□□□ -0.98
C9orf3-205ENST00000427193 NKG7Q16617 165 aa8.94□□□□□ -0.98
C9orf3-205ENST00000427193 ZNF648Q5T619 568 aaPredicted RBP8.94□□□□□ -0.98
C9orf3-205ENST00000427193 MFSD4AQ8N468 514 aa8.94□□□□□ -0.98
C9orf3-205ENST00000427193 FAM155AB1AL88 458 aaPredicted RBP8.93□□□□□ -0.98
C9orf3-205ENST00000427193 ZSWIM9Q86XI8 627 aa8.93□□□□□ -0.98
C9orf3-205ENST00000427193 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
C9orf3-205ENST00000427193 GLI2P10070 1586 aa8.92□□□□□ -0.98
C9orf3-205ENST00000427193 CST3P01034 146 aaPredicted RBP8.92□□□□□ -0.98
C9orf3-205ENST00000427193 GRK4P32298 578 aa8.92□□□□□ -0.98
C9orf3-205ENST00000427193 CDK8P49336 464 aa8.92□□□□□ -0.98
C9orf3-205ENST00000427193 LETMD1Q6P1Q0 360 aa8.92□□□□□ -0.98
C9orf3-205ENST00000427193 AGMOQ6ZNB7 445 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms