RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 AP1ARQ63HQ0 302 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 DENND2AQ9ULE3 1009 aa15.96■□□□□ 0.15
PTPN13-203ENST00000427191 H0YCG3 227 aa15.96■□□□□ 0.14
PTPN13-203ENST00000427191 KRT71Q3SY84 523 aa15.96■□□□□ 0.14
PTPN13-203ENST00000427191 TRIM42Q8IWZ5 723 aa15.96■□□□□ 0.14
PTPN13-203ENST00000427191 DEUP1Q05D60 604 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 ANO1Q5XXA6 986 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 TRIM4Q9C037 500 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 CTTNBP2NLQ9P2B4 639 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPN13-203ENST00000427191 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 KIAA0586Q9BVV6 1533 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 STX17P56962 302 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 IFIH1Q9BYX4 1025 aaKnown RBP15.95■□□□□ 0.14
PTPN13-203ENST00000427191 AMFRQ9UKV5 643 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 KRT9P35527 623 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 CASC4Q6P4E1 433 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPN13-203ENST00000427191 LINS1Q8NG48 757 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 THAP12O43422 761 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 OPHN1O60890 802 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 RSAD2Q8WXG1 361 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 SPZ1Q9BXG8 430 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 TRIM6Q9C030 488 aaPredicted RBP15.95■□□□□ 0.14
PTPN13-203ENST00000427191 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPN13-203ENST00000427191 NLRP12P59046 1061 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 KRT25Q7Z3Z0 450 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 NME9Q86XW9 330 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 PPP1R9AQ9ULJ8 1098 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 SAR1BQ9Y6B6 198 aa15.95■□□□□ 0.14
PTPN13-203ENST00000427191 ARHGEF35A5YM69 484 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 TTC4O95801 387 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 LMNB2Q03252 620 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 PPP1R2P3Q6NXS1 205 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 RIOK1Q9BRS2 568 aaKnown RBP15.94■□□□□ 0.14
PTPN13-203ENST00000427191 SPC25Q9HBM1 224 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 ANKFY1Q9P2R3 1169 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 ZBTB24O43167 697 aaPredicted RBP15.94■□□□□ 0.14
PTPN13-203ENST00000427191 GCKP35557 465 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 ZNF75DP51815 510 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 FAF1Q9UNN5 650 aaPredicted RBP15.94■□□□□ 0.14
PTPN13-203ENST00000427191 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 CCNT1O60563 726 aaKnown RBP15.94■□□□□ 0.14
PTPN13-203ENST00000427191 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 MAGEB6Q8N7X4 407 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 NRBF2Q96F24 287 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 PNMA2Q9UL42 364 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 WWC3Q9ULE0 1092 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 NLRP7Q8WX94 980 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 TRPC6Q9Y210 931 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 FANCCQ00597 558 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 GRM1Q13255 1194 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 RTEL1Q9NZ71 1219 aa15.94■□□□□ 0.14
PTPN13-203ENST00000427191 LRRD1A4D1F6 860 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 DNM2P50570 870 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 ESRRGP62508 458 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 DCTPP1Q9H773 170 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 AMOTL2Q9Y2J4 779 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 PPIP5K1Q6PFW1 1433 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 ATP5J2-PTCD1G3V325 749 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 SMIM24O75264 130 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 CTNNA1P35221 906 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 GARSP41250 739 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 AKAP4Q5JQC9 854 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 TUBB6Q9BUF5 446 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 NACA2Q9H009 215 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 MICAL1Q8TDZ2 1067 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 STAG1Q8WVM7 1258 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 ANGEL1Q9UNK9 670 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 RPS6KB1P23443 525 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 OAS2P29728 719 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 SLC17A8Q8NDX2 589 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 RLBP1P12271 317 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 ZNF445P59923 1031 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 DDX41Q9UJV9 622 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 KDM2BQ8NHM5 1336 aa15.93■□□□□ 0.14
PTPN13-203ENST00000427191 CDK13Q14004 1512 aaKnown RBP15.93■□□□□ 0.14
PTPN13-203ENST00000427191 CCDC169A6NNP5 214 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 TPTE2Q6XPS3 522 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 CADPS2Q86UW7 1296 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 ASPHQ12797 758 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 DNM3Q9UQ16 869 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 KLHL30Q0D2K2 578 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 TSC1Q92574 1164 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 EMILIN1Q9Y6C2 1016 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 ARHGAP42A6NI28 874 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 LMNB1P20700 586 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 PHEXP78562 749 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 EFHD1Q9BUP0 239 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 CEP104O60308 925 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 SNCBQ16143 134 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 BABAM1Q9NWV8 329 aa15.92■□□□□ 0.14
PTPN13-203ENST00000427191 PICALMQ13492 652 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms