RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 SART3Q15020 963 aaKnown RBP18.56■□□□□ 0.56
SCRN1-205ENST00000425819 IQCA1Q86XH1 822 aa18.56■□□□□ 0.56
SCRN1-205ENST00000425819 FBXL16Q8N461 479 aa18.56■□□□□ 0.56
SCRN1-205ENST00000425819 ZSCAN10Q96SZ4 725 aaPredicted RBP18.56■□□□□ 0.56
SCRN1-205ENST00000425819 SENP2Q9HC62 589 aa18.56■□□□□ 0.56
SCRN1-205ENST00000425819 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
SCRN1-205ENST00000425819 NAP1L2Q9ULW6 460 aaPredicted RBP18.56■□□□□ 0.56
SCRN1-205ENST00000425819 ANGEL1Q9UNK9 670 aaKnown RBP18.56■□□□□ 0.56
SCRN1-205ENST00000425819 TNKSO95271 1327 aa18.56■□□□□ 0.56
SCRN1-205ENST00000425819 ERICH2A1L162 156 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 NMT2O60551 498 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 EPHX2P34913 555 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 ME3Q16798 604 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 APOBEC3FQ8IUX4 373 aaKnown RBP18.55■□□□□ 0.56
SCRN1-205ENST00000425819 ZSCAN31Q96LW9 406 aaPredicted RBP18.55■□□□□ 0.56
SCRN1-205ENST00000425819 LY9Q9HBG7 655 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 PGAP2Q9UHJ9 254 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
SCRN1-205ENST00000425819 STK3Q13188 491 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 WTAPQ15007 396 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 NFXL1Q6ZNB6 911 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 DEFB129Q9H1M3 183 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 BRPF3Q9ULD4 1205 aa18.55■□□□□ 0.56
SCRN1-205ENST00000425819 SIPA1L1O43166 1804 aa18.54■□□□□ 0.56
SCRN1-205ENST00000425819 KLF18A0A0U1RQI7 1052 aa18.54■□□□□ 0.56
SCRN1-205ENST00000425819 AKR1B1P15121 316 aa18.54■□□□□ 0.56
SCRN1-205ENST00000425819 NT5C2P49902 561 aa18.54■□□□□ 0.56
SCRN1-205ENST00000425819 SEC23AQ15436 765 aa18.54■□□□□ 0.56
SCRN1-205ENST00000425819 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
SCRN1-205ENST00000425819 NECAB1Q8N987 351 aa18.54■□□□□ 0.56
SCRN1-205ENST00000425819 MTA3Q9BTC8 594 aa18.54■□□□□ 0.56
SCRN1-205ENST00000425819 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.54■□□□□ 0.56
SCRN1-205ENST00000425819 SH2B1Q9NRF2 756 aaPredicted RBP18.54■□□□□ 0.56
SCRN1-205ENST00000425819 IQCA1LA6NCM1 817 aa18.53■□□□□ 0.56
SCRN1-205ENST00000425819 USP50Q70EL3 339 aaPredicted RBP18.53■□□□□ 0.56
SCRN1-205ENST00000425819 MIGA2Q7L4E1 593 aa18.53■□□□□ 0.56
SCRN1-205ENST00000425819 ENAHQ8N8S7 591 aaPredicted RBP18.53■□□□□ 0.56
SCRN1-205ENST00000425819 NEDD1Q8NHV4 660 aa18.53■□□□□ 0.56
SCRN1-205ENST00000425819 TEPSINQ96N21 525 aa18.53■□□□□ 0.56
SCRN1-205ENST00000425819 IL17RBQ9NRM6 502 aa18.53■□□□□ 0.56
SCRN1-205ENST00000425819 HERC5Q9UII4 1024 aaKnown RBP18.53■□□□□ 0.56
SCRN1-205ENST00000425819 CCDC69A6NI79 296 aa18.52■□□□□ 0.56
SCRN1-205ENST00000425819 POTECB2RU33 542 aa18.52■□□□□ 0.56
SCRN1-205ENST00000425819 LIFRP42702 1097 aa18.52■□□□□ 0.56
SCRN1-205ENST00000425819 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
SCRN1-205ENST00000425819 CCDC83Q8IWF9 413 aa18.52■□□□□ 0.56
SCRN1-205ENST00000425819 TAF1DQ9H5J8 278 aaPredicted RBP18.52■□□□□ 0.56
SCRN1-205ENST00000425819 GOLGA8BA8MQT2 603 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 MPHOSPH10O00566 681 aaKnown RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 PDIA3P30101 505 aaKnown RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 EVCP57679 992 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 CUL4AQ13619 759 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 CERKLQ49MI3 558 aaPredicted RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 EAPPQ56P03 285 aaPredicted RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 IFIT1BQ5T764 474 aaKnown RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 PRAMEF18Q5VWM3 479 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 TATDN1Q6P1N9 297 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 SGMS1Q86VZ5 419 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 DCPSQ96C86 337 aaKnown RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 SLKQ9H2G2 1235 aaPredicted RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 TCP11L1Q9NUJ3 509 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 PITPNM2Q9BZ72 1349 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 GDF11O95390 407 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 ST3GAL1Q11201 340 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 TMTC2Q8N394 836 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 ZNF274Q96GC6 653 aaPredicted RBP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 CCDC17Q96LX7 622 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 MYL10Q9BUA6 226 aa18.51■□□□□ 0.55
SCRN1-205ENST00000425819 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCRN1-205ENST00000425819 CCT2P78371 535 aaKnown RBP18.5■□□□□ 0.55
SCRN1-205ENST00000425819 RRP1BQ14684 758 aaKnown RBP18.5■□□□□ 0.55
SCRN1-205ENST00000425819 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
SCRN1-205ENST00000425819 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
SCRN1-205ENST00000425819 NBPF12Q5TAG4 269 aaPredicted RBP18.5■□□□□ 0.55
SCRN1-205ENST00000425819 RCSD1Q6JBY9 416 aa18.5■□□□□ 0.55
SCRN1-205ENST00000425819 APOA5Q6Q788 366 aa18.5■□□□□ 0.55
SCRN1-205ENST00000425819 SLC12A7Q9Y666 1083 aa18.5■□□□□ 0.55
SCRN1-205ENST00000425819 TBC1D12O60347 775 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 PFKFB2O60825 505 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 RXRAP19793 462 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 SCRN1Q12765 414 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 MICU3Q86XE3 530 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 DGKHQ86XP1 1220 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 GTF3C6Q969F1 213 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 CEP95Q96GE4 821 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 STX8Q9UNK0 236 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 HPS5Q9UPZ3 1129 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 PPP2R3BQ9Y5P8 575 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 WDR90Q96KV7 1748 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 PLIN4Q96Q06 1357 aa18.49■□□□□ 0.55
SCRN1-205ENST00000425819 ZBTB43O43298 467 aa18.48■□□□□ 0.55
SCRN1-205ENST00000425819 DTNBO60941 627 aa18.48■□□□□ 0.55
SCRN1-205ENST00000425819 ABCB5Q2M3G0 1257 aa18.48■□□□□ 0.55
SCRN1-205ENST00000425819 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
SCRN1-205ENST00000425819 SULF1Q8IWU6 871 aa18.48■□□□□ 0.55
SCRN1-205ENST00000425819 ZNF654Q8IZM8 581 aa18.48■□□□□ 0.55
SCRN1-205ENST00000425819 NCOA5Q9HCD5 579 aaKnown RBP18.48■□□□□ 0.55
SCRN1-205ENST00000425819 IGKV6D-41A0A0C4DH26 115 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms