RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 EPB41L2O43491 1005 aaKnown RBP15.87■□□□□ 0.13
PRPF39-202ENST00000424478 TNNI2P48788 182 aa15.87■□□□□ 0.13
PRPF39-202ENST00000424478 FAM83AQ86UY5 434 aa15.87■□□□□ 0.13
PRPF39-202ENST00000424478 EIF5BO60841 1220 aaKnown RBP15.87■□□□□ 0.13
PRPF39-202ENST00000424478 APOBRQ0VD83 1088 aa15.87■□□□□ 0.13
PRPF39-202ENST00000424478 RABEP1Q15276 862 aa15.87■□□□□ 0.13
PRPF39-202ENST00000424478 ATRNL1Q5VV63 1379 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 TNFAIP1Q13829 316 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 TOB2Q14106 344 aaPredicted RBP15.86■□□□□ 0.13
PRPF39-202ENST00000424478 KRT32Q14532 448 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
PRPF39-202ENST00000424478 CCDC144CPQ8IYA2 1237 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 ZNF444Q8N0Y2 327 aaPredicted RBP15.86■□□□□ 0.13
PRPF39-202ENST00000424478 TTC14Q96N46 770 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
PRPF39-202ENST00000424478 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 SLC3A2P08195 630 aaKnown RBP15.86■□□□□ 0.13
PRPF39-202ENST00000424478 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 ATP2B2Q01814 1243 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 APOBEC3FQ8IUX4 373 aaKnown RBP15.86■□□□□ 0.13
PRPF39-202ENST00000424478 SSC5DA1L4H1 1573 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 ROBO3Q96MS0 1386 aa15.86■□□□□ 0.13
PRPF39-202ENST00000424478 PSMA5P28066 241 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 EXOSC10Q01780 885 aaKnown RBP15.85■□□□□ 0.13
PRPF39-202ENST00000424478 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.85■□□□□ 0.13
PRPF39-202ENST00000424478 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 RNF41Q9H4P4 317 aaPredicted RBP15.85■□□□□ 0.13
PRPF39-202ENST00000424478 TAOK2Q9UL54 1235 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 IFIT3O14879 490 aaKnown RBP15.85■□□□□ 0.13
PRPF39-202ENST00000424478 INPP5BP32019 993 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 MCM5P33992 734 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 FKBP1CQ5VVH2 108 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 ESR2Q92731 530 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 ZKSCAN4Q969J2 545 aaPredicted RBP15.85■□□□□ 0.13
PRPF39-202ENST00000424478 TNKSO95271 1327 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 NECAB1Q8N987 351 aa15.85■□□□□ 0.13
PRPF39-202ENST00000424478 GH2P01242 217 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 ANP32AP39687 249 aaKnown RBP15.84■□□□□ 0.13
PRPF39-202ENST00000424478 CERKLQ49MI3 558 aaPredicted RBP15.84■□□□□ 0.13
PRPF39-202ENST00000424478 TMEM67Q5HYA8 995 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 KRT23Q9C075 422 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 GPBP1L1Q9HC44 474 aaPredicted RBP15.84■□□□□ 0.13
PRPF39-202ENST00000424478 TPCN1Q9ULQ1 816 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 CEP350Q5VT06 3117 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 CDCA5Q96FF9 252 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 TM6SF1Q9BZW5 370 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 BRPF3Q9ULD4 1205 aa15.84■□□□□ 0.13
PRPF39-202ENST00000424478 RAD21O60216 631 aa15.83■□□□□ 0.13
PRPF39-202ENST00000424478 NPM3O75607 178 aaKnown RBP15.83■□□□□ 0.13
PRPF39-202ENST00000424478 FGRP09769 529 aa15.83■□□□□ 0.13
PRPF39-202ENST00000424478 SEPT2Q15019 361 aa15.83■□□□□ 0.13
PRPF39-202ENST00000424478 PNMA8AQ86V59 439 aaPredicted RBP15.83■□□□□ 0.13
PRPF39-202ENST00000424478 ENAHQ8N8S7 591 aaPredicted RBP15.83■□□□□ 0.13
PRPF39-202ENST00000424478 CEP95Q96GE4 821 aa15.83■□□□□ 0.13
PRPF39-202ENST00000424478 CNNM2Q9H8M5 875 aa15.83■□□□□ 0.13
PRPF39-202ENST00000424478 ORC4O43929 436 aa15.83■□□□□ 0.12
PRPF39-202ENST00000424478 DGKZQ13574 1117 aa15.83■□□□□ 0.12
PRPF39-202ENST00000424478 UBAC1Q9BSL1 405 aa15.83■□□□□ 0.12
PRPF39-202ENST00000424478 CCT2P78371 535 aaKnown RBP15.83■□□□□ 0.12
PRPF39-202ENST00000424478 IGDCC4Q8TDY8 1250 aa15.83■□□□□ 0.12
PRPF39-202ENST00000424478 NCOA5Q9HCD5 579 aaKnown RBP15.83■□□□□ 0.12
PRPF39-202ENST00000424478 FOXP4Q8IVH2 680 aaPredicted RBP15.82■□□□□ 0.12
PRPF39-202ENST00000424478 LRRC47Q8N1G4 583 aaKnown RBP15.82■□□□□ 0.12
PRPF39-202ENST00000424478 WRNIP1Q96S55 665 aa15.82■□□□□ 0.12
PRPF39-202ENST00000424478 ZSCAN10Q96SZ4 725 aaPredicted RBP15.82■□□□□ 0.12
PRPF39-202ENST00000424478 EHD4Q9H223 541 aa15.82■□□□□ 0.12
PRPF39-202ENST00000424478 MMP14P50281 582 aa15.82■□□□□ 0.12
PRPF39-202ENST00000424478 TTLL12Q14166 644 aaPredicted RBP15.82■□□□□ 0.12
PRPF39-202ENST00000424478 IL17RAQ96F46 866 aa15.82■□□□□ 0.12
PRPF39-202ENST00000424478 LY9Q9HBG7 655 aa15.82■□□□□ 0.12
PRPF39-202ENST00000424478 SH2B2O14492 632 aaPredicted RBP15.81■□□□□ 0.12
PRPF39-202ENST00000424478 ST18O60284 1047 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 ZYXQ15942 572 aaKnown RBP15.81■□□□□ 0.12
PRPF39-202ENST00000424478 NFXL1Q6ZNB6 911 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 CMTR1Q8N1G2 835 aaKnown RBP15.81■□□□□ 0.12
PRPF39-202ENST00000424478 BAZ2BQ9UIF8 2168 aaKnown RBP15.81■□□□□ 0.12
PRPF39-202ENST00000424478 GUCY1A2P33402 732 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 ME3Q16798 604 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 ABCB5Q2M3G0 1257 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 RCSD1Q6JBY9 416 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 TATDN1Q6P1N9 297 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 CNKSR2Q8WXI2 1034 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 KLF18A0A0U1RQI7 1052 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 PHF20L1A8MW92 1017 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 MICU3Q86XE3 530 aa15.81■□□□□ 0.12
PRPF39-202ENST00000424478 CDC37L1Q7L3B6 337 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 YY1P25490 414 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 ECE1P42892 770 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 WTAPQ15007 396 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 SEC23AQ15436 765 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 IQCA1Q86XH1 822 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 CLIP2Q9UDT6 1046 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 SWAP70Q9UH65 585 aa15.8■□□□□ 0.12
PRPF39-202ENST00000424478 ANGEL1Q9UNK9 670 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms