RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 GATA6Q92908 595 aa8.33□□□□□ -1.08
LINC00458-201ENST00000423442 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
LINC00458-201ENST00000423442 ZFYVE28Q9HCC9 887 aa8.33□□□□□ -1.08
LINC00458-201ENST00000423442 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
LINC00458-201ENST00000423442 NUP155O75694 1391 aa8.33□□□□□ -1.08
LINC00458-201ENST00000423442 PNPLA6Q8IY17 1366 aa8.33□□□□□ -1.08
LINC00458-201ENST00000423442 TMEM131LA2VDJ0 1609 aa8.32□□□□□ -1.08
LINC00458-201ENST00000423442 PTPRUQ92729 1446 aa8.32□□□□□ -1.08
LINC00458-201ENST00000423442 ADH5P11766 374 aa8.32□□□□□ -1.08
LINC00458-201ENST00000423442 ZNF423Q2M1K9 1284 aa8.32□□□□□ -1.08
LINC00458-201ENST00000423442 VSIG10LQ86VR7 867 aa8.32□□□□□ -1.08
LINC00458-201ENST00000423442 ACTL7BQ9Y614 415 aa8.32□□□□□ -1.08
LINC00458-201ENST00000423442 MST1RQ04912 1400 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 FAM13AO94988 1023 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 NFICP08651 508 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 MAOBP27338 520 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 USP5P45974 858 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 PCDH1Q08174 1060 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 SPRED3Q2MJR0 410 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINC00458-201ENST00000423442 FBXL18Q96ME1 805 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
LINC00458-201ENST00000423442 EP400Q96L91 3159 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 PIK3R4Q99570 1358 aa8.31□□□□□ -1.08
LINC00458-201ENST00000423442 A0A096LPE4 126 aa8.3□□□□□ -1.08
LINC00458-201ENST00000423442 A0A1W2PPZ6 126 aa8.3□□□□□ -1.08
LINC00458-201ENST00000423442 RAB6AP20340 208 aa8.3□□□□□ -1.08
LINC00458-201ENST00000423442 GRIA4P48058 902 aa8.3□□□□□ -1.08
LINC00458-201ENST00000423442 GJD3Q8N144 294 aa8.3□□□□□ -1.08
LINC00458-201ENST00000423442 YIPF2Q9BWQ6 316 aa8.3□□□□□ -1.08
LINC00458-201ENST00000423442 ANO2Q9NQ90 1003 aa8.3□□□□□ -1.08
LINC00458-201ENST00000423442 TRPC5Q9UL62 973 aaPredicted RBP8.3□□□□□ -1.08
LINC00458-201ENST00000423442 DCCP43146 1447 aa8.29□□□□□ -1.08
LINC00458-201ENST00000423442 ECEL1O95672 775 aa8.29□□□□□ -1.08
LINC00458-201ENST00000423442 OGFOD2Q6N063 350 aa8.29□□□□□ -1.08
LINC00458-201ENST00000423442 CCNJLQ8IV13 435 aa8.29□□□□□ -1.08
LINC00458-201ENST00000423442 CLEC4MQ9H2X3 399 aaPredicted RBP8.29□□□□□ -1.08
LINC00458-201ENST00000423442 LRRC4CQ9HCJ2 640 aa8.29□□□□□ -1.08
LINC00458-201ENST00000423442 RPRD2Q5VT52 1461 aaKnown RBP8.29□□□□□ -1.08
LINC00458-201ENST00000423442 TRPM2O94759 1503 aa8.29□□□□□ -1.08
LINC00458-201ENST00000423442 A0A1W2PP55 124 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 CARNS1A5YM72 827 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 POU4F3Q15319 338 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 ZNF326Q5BKZ1 582 aaKnown RBP8.28□□□□□ -1.08
LINC00458-201ENST00000423442 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 DYMQ7RTS9 669 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 FLCNQ8NFG4 579 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 TCF12Q99081 682 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 SEMA6CQ9H3T2 930 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 FAM105AQ9NUU6 356 aa8.28□□□□□ -1.08
LINC00458-201ENST00000423442 ZC3H7BQ9UGR2 993 aaKnown RBP8.28□□□□□ -1.08
LINC00458-201ENST00000423442 RRBP1Q9P2E9 1410 aaKnown RBP8.28□□□□□ -1.08
LINC00458-201ENST00000423442 XRN1Q8IZH2 1706 aaKnown RBP8.27□□□□□ -1.09
LINC00458-201ENST00000423442 ABL1P00519 1130 aa8.27□□□□□ -1.09
LINC00458-201ENST00000423442 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
LINC00458-201ENST00000423442 ZNF211Q13398 564 aaPredicted RBP8.27□□□□□ -1.09
LINC00458-201ENST00000423442 DUSP27Q5VZP5 1158 aa8.27□□□□□ -1.09
LINC00458-201ENST00000423442 LIN7BQ9HAP6 207 aa8.27□□□□□ -1.09
LINC00458-201ENST00000423442 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
LINC00458-201ENST00000423442 ATRNO75882 1429 aa8.27□□□□□ -1.09
LINC00458-201ENST00000423442 UNC13BO14795 1591 aa8.27□□□□□ -1.09
LINC00458-201ENST00000423442 CYP11A1P05108 521 aa8.26□□□□□ -1.09
LINC00458-201ENST00000423442 JAG1P78504 1218 aa8.26□□□□□ -1.09
LINC00458-201ENST00000423442 SF3B2Q13435 895 aaKnown RBP8.26□□□□□ -1.09
LINC00458-201ENST00000423442 MAP7Q14244 749 aa8.26□□□□□ -1.09
LINC00458-201ENST00000423442 TRIM56Q9BRZ2 755 aaKnown RBP8.26□□□□□ -1.09
LINC00458-201ENST00000423442 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
LINC00458-201ENST00000423442 DYNC1LI2O43237 492 aaPredicted RBP8.25□□□□□ -1.09
LINC00458-201ENST00000423442 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
LINC00458-201ENST00000423442 ITGB5P18084 799 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 DEFB132Q7Z7B7 95 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 GALNT12Q8IXK2 581 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 ACSS3Q9H6R3 686 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 LGR6Q9HBX8 967 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 RAD18Q9NS91 495 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 AP4E1Q9UPM8 1137 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 PTCH1Q13635 1447 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 NALCNQ8IZF0 1738 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 NRXN3Q9Y4C0 1643 aa8.25□□□□□ -1.09
LINC00458-201ENST00000423442 ADGRL3Q9HAR2 1447 aa8.24□□□□□ -1.09
LINC00458-201ENST00000423442 ASPAP45381 313 aa8.24□□□□□ -1.09
LINC00458-201ENST00000423442 ASIC4Q96FT7 647 aa8.24□□□□□ -1.09
LINC00458-201ENST00000423442 ORAI2Q96SN7 254 aa8.24□□□□□ -1.09
LINC00458-201ENST00000423442 C1GALT1Q9NS00 363 aa8.24□□□□□ -1.09
LINC00458-201ENST00000423442 LRP5O75197 1615 aa8.24□□□□□ -1.09
LINC00458-201ENST00000423442 E9PCH4 1651 aa8.24□□□□□ -1.09
LINC00458-201ENST00000423442 METP08581 1390 aa8.23□□□□□ -1.09
LINC00458-201ENST00000423442 BLMP54132 1417 aaPredicted RBP8.23□□□□□ -1.09
LINC00458-201ENST00000423442 LAMC1P11047 1609 aa8.23□□□□□ -1.09
LINC00458-201ENST00000423442 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.23□□□□□ -1.09
LINC00458-201ENST00000423442 SEZ6L2Q6UXD5 910 aa8.23□□□□□ -1.09
LINC00458-201ENST00000423442 MTMR7Q9Y216 660 aa8.23□□□□□ -1.09
LINC00458-201ENST00000423442 C1orf167Q5SNV9 1468 aa8.23□□□□□ -1.09
LINC00458-201ENST00000423442 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
LINC00458-201ENST00000423442 IQGAP3Q86VI3 1631 aa8.22□□□□□ -1.09
LINC00458-201ENST00000423442 NAIPQ13075 1403 aa8.22□□□□□ -1.09
LINC00458-201ENST00000423442 CYP27A1Q02318 531 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms