RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 ARSJQ5FYB0 599 aaPredicted RBP6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 PI16Q6UXB8 463 aa6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 MPRIPQ6WCQ1 1025 aa6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 CMTR1Q8N1G2 835 aaKnown RBP6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 SLC43A3Q8NBI5 491 aa6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 LINC00116Q8NCU8 138 aa6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 EPS8L3Q8TE67 593 aaKnown RBP6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 ZNF526Q8TF50 670 aaPredicted RBP6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 ACDQ96AP0 544 aa6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 MAP2P11137 1827 aaKnown RBP6.4□□□□□ -1.38
CDC42EP3-202ENST00000422687 UBR3Q6ZT12 1888 aa6.4□□□□□ -1.39
CDC42EP3-202ENST00000422687 FLT4P35916 1363 aa6.4□□□□□ -1.39
CDC42EP3-202ENST00000422687 SMG6Q86US8 1419 aaKnown RBP6.4□□□□□ -1.39
CDC42EP3-202ENST00000422687 PXDNLA1KZ92 1463 aa6.4□□□□□ -1.39
CDC42EP3-202ENST00000422687 PHACTR2O75167 634 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 GSK3AP49840 483 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 TGFB2P61812 414 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 MAP3K10Q02779 954 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 ITPK1Q13572 414 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 SMIM5Q71RC9 77 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 GALNT12Q8IXK2 581 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 UBXN4Q92575 508 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 SRCIN1Q9C0H9 1055 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 TONSLQ96HA7 1378 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 PLEKHG2Q9H7P9 1386 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 C10orf71Q711Q0 1435 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 PKD1L3Q7Z443 1732 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 KIAA1551Q9HCM1 1747 aa6.39□□□□□ -1.39
CDC42EP3-202ENST00000422687 BNIP3LO60238 219 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 XYLBO75191 536 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 MMP10P09238 476 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 BCRP11274 1271 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 ST13P50502 369 aaKnown RBP6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 JMYQ8N9B5 988 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 ZCCHC2Q9C0B9 1178 aaKnown RBP6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 CCSER2Q9H7U1 834 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 NEUROD4Q9HD90 331 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 NPHS2Q9NP85 383 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 FAM8A1Q9UBU6 413 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 DDX41Q9UJV9 622 aaKnown RBP6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 PCDHGC4Q9Y5F7 938 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 KDRP35968 1356 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 KIF13BQ9NQT8 1826 aa6.38□□□□□ -1.39
CDC42EP3-202ENST00000422687 WASHC2AQ641Q2 1341 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 EREGO14944 169 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 OIP5O43482 229 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 FAM157BP0CG42 384 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 KCNA3P22001 575 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 FGFR3P22607 806 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 NLGN1Q8N2Q7 840 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 ABHD17AQ96GS6 310 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 CEP63Q96MT8 703 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 GMLQ99445 158 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 OXCT2Q9BYC2 517 aaPredicted RBP6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 ENAMQ9NRM1 1142 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 ATG3Q9NT62 314 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 ABI2Q9NYB9 513 aaPredicted RBP6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 ASAP1Q9ULH1 1129 aa6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.37□□□□□ -1.39
CDC42EP3-202ENST00000422687 EFSO43281 561 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 PHKG2P15735 406 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 RACK1P63244 317 aaKnown RBP6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 FSTL1Q12841 308 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 C1orf127Q8N9H9 656 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 ACBD3Q9H3P7 528 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 SUV39H2Q9H5I1 410 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 SRA1Q9HD15 236 aaKnown RBP6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 BRD7Q9NPI1 651 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 NMRK2Q9NPI5 230 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 TMOD3Q9NYL9 352 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 GDF2Q9UK05 429 aaPredicted RBP6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 ITGB4P16144 1822 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 ZNF831Q5JPB2 1677 aa6.36□□□□□ -1.39
CDC42EP3-202ENST00000422687 CNTNAP4Q9C0A0 1308 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 A0A0G2JLW4 131 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 C2CD2LO14523 706 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 ATXN7O15265 892 aaPredicted RBP6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 POLR3DP05423 398 aaPredicted RBP6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 USP17L7P0C7H9 530 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 GYS1P13807 737 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 DPEP1P16444 411 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 TMF1P82094 1093 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 TNP2Q05952 138 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 TAF1CQ15572 869 aaPredicted RBP6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 MEI1Q5TIA1 1274 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 KIAA0319Q5VV43 1072 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 IFNL2Q8IZJ0 200 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 GLIS3Q8NEA6 775 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 PMEPA1Q969W9 287 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 SCARF2Q96GP6 870 aaPredicted RBP6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 DCAF5Q96JK2 942 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 HCN2Q9UL51 889 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 GJA3Q9Y6H8 435 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 ANKRD26Q9UPS8 1709 aa6.35□□□□□ -1.39
CDC42EP3-202ENST00000422687 ERVV-2B6SEH9 535 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 RPS6KA4O75676 772 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 ARAFP10398 606 aa6.34□□□□□ -1.39
CDC42EP3-202ENST00000422687 MAPTP10636 758 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms