RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SRRDQ9UH36 339 aa10.43□□□□□ -0.74
MDC1-204ENST00000422266 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
MDC1-204ENST00000422266 TTC41PQ6P2S7 1318 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 FAM196BA6NMK8 535 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 CYP2C8P10632 490 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 HOXA7P31268 230 aaPredicted RBP10.42□□□□□ -0.74
MDC1-204ENST00000422266 HMGCS2P54868 508 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 UBXN2AP68543 259 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 SLC4A8Q2Y0W8 1093 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 USP17L2Q6R6M4 530 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 ZNF333Q96JL9 665 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
MDC1-204ENST00000422266 MCM9Q9NXL9 1143 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 ZBTB21Q9ULJ3 1066 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 PTCH2Q9Y6C5 1203 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 NDUFB9Q9Y6M9 179 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 FOCADQ5VW36 1801 aa10.42□□□□□ -0.74
MDC1-204ENST00000422266 MYPNQ86TC9 1320 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 TCRBV5S4A2TA0A5A2 114 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 TNPO2O14787 897 aaKnown RBP10.41□□□□□ -0.74
MDC1-204ENST00000422266 GRK4P32298 578 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 MTMR2Q13614 643 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 ABCB5Q2M3G0 1257 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 SLAIN1Q8ND83 568 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 GCC1Q96CN9 775 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 CCDC17Q96LX7 622 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 FEZ1Q99689 392 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 DNAJC18Q9H819 358 aa10.41□□□□□ -0.74
MDC1-204ENST00000422266 DCP1AQ9NPI6 582 aaPredicted RBP10.41□□□□□ -0.74
MDC1-204ENST00000422266 GLRX3O76003 335 aaKnown RBP10.4□□□□□ -0.74
MDC1-204ENST00000422266 GDF11O95390 407 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 GH2P01242 217 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 GNAT2P19087 354 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 IRF5Q13568 498 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 GIMAP6Q6P9H5 292 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 TICAM2Q86XR7 235 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 CCAR1Q8IX12 1150 aaKnown RBP10.4□□□□□ -0.74
MDC1-204ENST00000422266 ANKRD13CQ8N6S4 541 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 KBTBD3Q8NAB2 608 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 PXYLP1Q8TE99 480 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 C12orf42Q96LP6 360 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 KIAA1683Q9H0B3 1180 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 ASCC2Q9H1I8 757 aaPredicted RBP10.4□□□□□ -0.74
MDC1-204ENST00000422266 SH2D4AQ9H788 454 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 ZNF287Q9HBT7 754 aa10.4□□□□□ -0.74
MDC1-204ENST00000422266 MYH1P12882 1939 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 MYO5AQ9Y4I1 1855 aaKnown RBP10.39□□□□□ -0.75
MDC1-204ENST00000422266 MBD4O95243 580 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 GABPAQ06546 454 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 TREML2Q5T2D2 321 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 TMEM179Q6ZVK1 233 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 LCORLQ8N3X6 602 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 ARHGAP39Q9C0H5 1083 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 ARPP21Q9UBL0 812 aaPredicted RBP10.39□□□□□ -0.75
MDC1-204ENST00000422266 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
MDC1-204ENST00000422266 PHIPQ8WWQ0 1821 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 PTPRFP10586 1907 aa10.39□□□□□ -0.75
MDC1-204ENST00000422266 USP17L15C9J2P7 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L13C9JLJ4 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L11C9JVI0 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L18D6R9N7 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L22D6RA61 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L17D6RBQ6 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L19D6RCP7 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L20D6RJB6 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 MPHOSPH10O00566 681 aaKnown RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 SMARCA5O60264 1052 aaPredicted RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 SLURP2P0DP57 97 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 MAPK4P31152 587 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 PLCD1P51178 756 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 CCNA1P78396 465 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 USP17L24Q0WX57 530 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 HDAC1Q13547 482 aaPredicted RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 RRP1BQ14684 758 aaKnown RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 CCDC84Q86UT8 332 aaPredicted RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 GPRC5AQ8NFJ5 357 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 SDR42E1Q8WUS8 393 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 SOCS4Q8WXH5 440 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 APPBP2Q92624 585 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 LPAR1Q92633 364 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 EDC3Q96F86 508 aaKnown RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 ARMT1Q9H993 441 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 ARHGEF10LQ9HCE6 1279 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.38□□□□□ -0.75
MDC1-204ENST00000422266 MORF4L1Q9UBU8 362 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 SLC4A4Q9Y6R1 1079 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 CDK5RAP2Q96SN8 1893 aa10.38□□□□□ -0.75
MDC1-204ENST00000422266 ATAD5Q96QE3 1844 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 LOC285556D6RIA3 1793 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 RNF113AO15541 343 aaKnown RBP10.37□□□□□ -0.75
MDC1-204ENST00000422266 ADCY3O60266 1144 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 SHMT1P34896 483 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 FLT3LGP49771 235 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 HERVK_113P62684 666 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 PRKCZQ05513 592 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 C12orf60Q5U649 245 aa10.37□□□□□ -0.75
MDC1-204ENST00000422266 NACAP1Q9BZK3 213 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms