RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 NKX2-4Q9H2Z4 354 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 SLC28A3Q9HAS3 691 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 TMEM39AQ9NV64 488 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 CACNA1GO43497 2377 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 ST18O60284 1047 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 CYP2C19P33261 490 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 HERVK_113P62684 666 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 ERVK-9P63128 1117 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 ERVK-24P63145 666 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 LMBR1LQ6UX01 489 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 SH3BP5LQ7L8J4 393 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 TRPV1Q8NER1 839 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 PAGR1Q9BTK6 254 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 RBPJLQ9UBG7 517 aa15.09■□□□□ 0.01
UFD1-203ENST00000421968 CHD7Q9P2D1 2997 aa15.08■□□□□ 0
UFD1-203ENST00000421968 PQBP1O60828 265 aaKnown RBP15.08■□□□□ 0
UFD1-203ENST00000421968 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
UFD1-203ENST00000421968 CHMP4AQ9BY43 222 aa15.08■□□□□ 0
UFD1-203ENST00000421968 CD320Q9NPF0 282 aa15.08■□□□□ 0
UFD1-203ENST00000421968 COG5Q9UP83 839 aa15.08■□□□□ 0
UFD1-203ENST00000421968 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
UFD1-203ENST00000421968 DDTLA6NHG4 134 aaPredicted RBP15.07■□□□□ 0
UFD1-203ENST00000421968 ENTPD3O75355 529 aa15.07■□□□□ 0
UFD1-203ENST00000421968 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
UFD1-203ENST00000421968 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
UFD1-203ENST00000421968 SH3D19Q5HYK7 790 aa15.07■□□□□ 0
UFD1-203ENST00000421968 TMEM240Q5SV17 173 aa15.07■□□□□ 0
UFD1-203ENST00000421968 CCDC174Q6PII3 467 aa15.07■□□□□ 0
UFD1-203ENST00000421968 CCDC146Q8IYE0 955 aa15.07■□□□□ 0
UFD1-203ENST00000421968 SLC44A5Q8NCS7 719 aa15.07■□□□□ 0
UFD1-203ENST00000421968 CYBAP13498 195 aa15.06■□□□□ 0
UFD1-203ENST00000421968 LRRC41Q15345 812 aa15.06■□□□□ 0
UFD1-203ENST00000421968 RASIP1Q5U651 963 aa15.06■□□□□ 0
UFD1-203ENST00000421968 WDR78Q5VTH9 848 aa15.06■□□□□ 0
UFD1-203ENST00000421968 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
UFD1-203ENST00000421968 TBC1D2Q9BYX2 928 aa15.06■□□□□ 0
UFD1-203ENST00000421968 PUS3Q9BZE2 481 aaKnown RBP15.06■□□□□ 0
UFD1-203ENST00000421968 HOXA7P31268 230 aaPredicted RBP15.05■□□□□ -0
UFD1-203ENST00000421968 PPIGQ13427 754 aaKnown RBP eCLIP15.05■□□□□ -01e-6■■■■□ 20.3
UFD1-203ENST00000421968 C16orf59Q7L2K0 433 aa15.05■□□□□ -0
UFD1-203ENST00000421968 PHOX2BQ99453 314 aa15.05■□□□□ -0
UFD1-203ENST00000421968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.05■□□□□ -0
UFD1-203ENST00000421968 TMOD4Q9NZQ9 345 aa15.05■□□□□ -0
UFD1-203ENST00000421968 CACNA1BQ00975 2339 aa15.05■□□□□ -0
UFD1-203ENST00000421968 BRWD1Q9NSI6 2320 aa15.05■□□□□ -0
UFD1-203ENST00000421968 WDFY4Q6ZS81 3184 aa15.05■□□□□ -0
UFD1-203ENST00000421968 GBF1Q92538 1859 aa15.04■□□□□ -0
UFD1-203ENST00000421968 SLC15A5A6NIM6 579 aa15.04■□□□□ -0
UFD1-203ENST00000421968 USP17L5A8MUK1 530 aa15.04■□□□□ -0
UFD1-203ENST00000421968 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
UFD1-203ENST00000421968 TIMP1P01033 207 aa15.04■□□□□ -0
UFD1-203ENST00000421968 LINS1Q8NG48 757 aa15.04■□□□□ -0
UFD1-203ENST00000421968 NPLOC4Q8TAT6 608 aa15.04■□□□□ -0
UFD1-203ENST00000421968 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
UFD1-203ENST00000421968 IDI2Q9BXS1 227 aa15.04■□□□□ -0
UFD1-203ENST00000421968 STK31Q9BXU1 1019 aa15.04■□□□□ -0
UFD1-203ENST00000421968 OSBPL5Q9H0X9 879 aaPredicted RBP15.04■□□□□ -0
UFD1-203ENST00000421968 YBX2Q9Y2T7 364 aaKnown RBP15.04■□□□□ -0
UFD1-203ENST00000421968 ZNF318Q5VUA4 2279 aa15.03■□□□□ -0
UFD1-203ENST00000421968 MROH5Q6ZUA9 1318 aa15.03■□□□□ -0
UFD1-203ENST00000421968 CLSPNQ9HAW4 1339 aa15.03■□□□□ -0
UFD1-203ENST00000421968 CFAP54Q96N23 3096 aa15.03■□□□□ -0
UFD1-203ENST00000421968 FAM196BA6NMK8 535 aa15.03■□□□□ -0
UFD1-203ENST00000421968 ZNF853P0CG23 659 aa15.03■□□□□ -0
UFD1-203ENST00000421968 MTMR2Q13614 643 aa15.03■□□□□ -0
UFD1-203ENST00000421968 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
UFD1-203ENST00000421968 EPHA10Q5JZY3 1008 aa15.03■□□□□ -0
UFD1-203ENST00000421968 ZNF365Q70YC5 407 aa15.03■□□□□ -0
UFD1-203ENST00000421968 G2E3Q7L622 706 aa15.03■□□□□ -0
UFD1-203ENST00000421968 HLA-CQ95604 372 aa15.03■□□□□ -0
UFD1-203ENST00000421968 AS3MTQ9HBK9 375 aa15.03■□□□□ -0
UFD1-203ENST00000421968 PHF24Q9UPV7 400 aa15.03■□□□□ -0
UFD1-203ENST00000421968 PTPRZ1P23471 2315 aaPredicted RBP15.03■□□□□ -0
UFD1-203ENST00000421968 DCDC2CA8MYV0 355 aa15.02■□□□□ -0
UFD1-203ENST00000421968 SEPT4O43236 478 aa15.02■□□□□ -0
UFD1-203ENST00000421968 HOXC6P09630 235 aa15.02■□□□□ -0
UFD1-203ENST00000421968 ACRP10323 421 aa15.02■□□□□ -0
UFD1-203ENST00000421968 ALADP13716 330 aa15.02■□□□□ -0
UFD1-203ENST00000421968 PTPREP23469 700 aa15.02■□□□□ -0
UFD1-203ENST00000421968 FAAP100Q0VG06 881 aa15.02■□□□□ -0
UFD1-203ENST00000421968 PPP2R2DQ66LE6 453 aa15.02■□□□□ -0
UFD1-203ENST00000421968 MFSD5Q6N075 450 aa15.02■□□□□ -0
UFD1-203ENST00000421968 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
UFD1-203ENST00000421968 MTCH2Q9Y6C9 303 aa15.02■□□□□ -0
UFD1-203ENST00000421968 IVNS1ABPQ9Y6Y0 642 aa15.02■□□□□ -0
UFD1-203ENST00000421968 ATAD5Q96QE3 1844 aa15.01□□□□□ -0.01
UFD1-203ENST00000421968 TBC1D12O60347 775 aa15.01□□□□□ -0.01
UFD1-203ENST00000421968 PRDX5P30044 214 aa15.01□□□□□ -0.01
UFD1-203ENST00000421968 CCNA1P78396 465 aa15.01□□□□□ -0.01
UFD1-203ENST00000421968 PICALMQ13492 652 aa15.01□□□□□ -0.01
UFD1-203ENST00000421968 FAM47AQ5JRC9 791 aa15.01□□□□□ -0.01
UFD1-203ENST00000421968 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
UFD1-203ENST00000421968 DNAAF4Q8WXU2 420 aa15.01□□□□□ -0.01
UFD1-203ENST00000421968 TRANK1O15050 2925 aa15□□□□□ -0.01
UFD1-203ENST00000421968 APBB1O00213 710 aa15□□□□□ -0.01
UFD1-203ENST00000421968 LDHBP07195 334 aaKnown RBP15□□□□□ -0.01
UFD1-203ENST00000421968 CSF2RAP15509 400 aa15□□□□□ -0.01
UFD1-203ENST00000421968 CAP2P40123 477 aa15□□□□□ -0.01
UFD1-203ENST00000421968 BACE1P56817 501 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms