RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 DACH1Q9UI36 760 aa18.14■□□□□ 0.49
TRIM13-204ENST00000420995 CASP1P29466 404 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 KLHL10Q6JEL2 608 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 CREBRFQ8IUR6 639 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 A0A0U1RQG5 324 aaPredicted RBP18.13■□□□□ 0.49
TRIM13-204ENST00000420995 FAM205CA6NFA0 338 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 FAM193AP78312 1265 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 NR1I3Q14994 352 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 ALX1Q15699 326 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 MFSD6Q6ZSS7 791 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 FOXP1Q9H334 677 aaPredicted RBP18.13■□□□□ 0.49
TRIM13-204ENST00000420995 CABP5Q9NP86 173 aa18.13■□□□□ 0.49
TRIM13-204ENST00000420995 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
TRIM13-204ENST00000420995 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 OAS2P29728 719 aaKnown RBP18.12■□□□□ 0.49
TRIM13-204ENST00000420995 PLCD1P51178 756 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 STX17P56962 302 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 RASGRF1Q13972 1273 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 SPATA5Q8NB90 893 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 NEK11Q8NG66 645 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 CPLX3Q8WVH0 158 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 UBXN6Q9BZV1 441 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 TRMT112Q9UI30 125 aaKnown RBP18.12■□□□□ 0.49
TRIM13-204ENST00000420995 SRPRBQ9Y5M8 271 aaKnown RBP18.12■□□□□ 0.49
TRIM13-204ENST00000420995 LRP6O75581 1613 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 A0A087X0B3 334 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 ST5P78524 1137 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 WTAPQ15007 396 aa18.12■□□□□ 0.49
TRIM13-204ENST00000420995 ZNF335Q9H4Z2 1342 aaPredicted RBP18.12■□□□□ 0.49
TRIM13-204ENST00000420995 A0A1B0GTH6 734 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 AFMP43652 599 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 TDO2P48775 406 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 LCORLQ8N3X6 602 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 CRACR2BQ8N4Y2 399 aaPredicted RBP18.11■□□□□ 0.49
TRIM13-204ENST00000420995 CNNM2Q9H8M5 875 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 AKR1B15C9JRZ8 316 aaPredicted RBP18.11■□□□□ 0.49
TRIM13-204ENST00000420995 UQCRFS1P1P0C7P4 283 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
TRIM13-204ENST00000420995 PUM3Q15397 648 aaKnown RBP18.11■□□□□ 0.49
TRIM13-204ENST00000420995 RAD9BQ6WBX8 426 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 APTXQ7Z2E3 356 aaKnown RBP18.11■□□□□ 0.49
TRIM13-204ENST00000420995 SMYD4Q8IYR2 804 aaPredicted RBP18.11■□□□□ 0.49
TRIM13-204ENST00000420995 TRIML1Q8N9V2 468 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 SPATA20Q8TB22 786 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 SHISA4Q96DD7 197 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 EPSTI1Q96J88 318 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 KRT23Q9C075 422 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 ARFGAP3Q9NP61 516 aa18.11■□□□□ 0.49
TRIM13-204ENST00000420995 DEXIO95424 95 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 CCDC175P0C221 793 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 HNRNPH2P55795 449 aaKnown RBP18.1■□□□□ 0.49
TRIM13-204ENST00000420995 SMC1AQ14683 1233 aaKnown RBP18.1■□□□□ 0.49
TRIM13-204ENST00000420995 PIGBQ92521 554 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 CALCOCO1Q9P1Z2 691 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 RBL2Q08999 1139 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 MAP3K12Q12852 859 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 ZNF579Q8NAF0 562 aaKnown RBP18.1■□□□□ 0.49
TRIM13-204ENST00000420995 LPIN2Q92539 896 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 RABGGTAQ92696 567 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 GOLGA1Q92805 767 aa18.1■□□□□ 0.49
TRIM13-204ENST00000420995 SOS2Q07890 1332 aaPredicted RBP18.1■□□□□ 0.49
TRIM13-204ENST00000420995 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 hCG_1642624A0A1W2PR95 340 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 STARD3NLO95772 234 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 IGSF22Q8N9C0 903 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 MIGA1Q8NAN2 632 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 ZBTB9Q96C00 473 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 NID2Q14112 1375 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 ATP8B1O43520 1251 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 FGFR2P21802 821 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 ERCC5P28715 1186 aaPredicted RBP18.09■□□□□ 0.49
TRIM13-204ENST00000420995 SART3Q15020 963 aaKnown RBP18.09■□□□□ 0.49
TRIM13-204ENST00000420995 EARS2Q5JPH6 523 aaKnown RBP18.09■□□□□ 0.49
TRIM13-204ENST00000420995 FUT8Q9BYC5 575 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 ADGRG1Q9Y653 693 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
TRIM13-204ENST00000420995 SMIM22K7EJ46 135 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 COBLO75128 1261 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 GYS2P54840 703 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 ZNF654Q8IZM8 581 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 FANCBQ8NB91 859 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 STAG1Q8WVM7 1258 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.49
TRIM13-204ENST00000420995 SYNRGQ9UMZ2 1314 aa18.08■□□□□ 0.49
TRIM13-204ENST00000420995 ERICH2A1L162 156 aa18.08■□□□□ 0.48
TRIM13-204ENST00000420995 TFRCP02786 760 aaKnown RBP18.08■□□□□ 0.48
TRIM13-204ENST00000420995 KANK3Q6NY19 840 aa18.08■□□□□ 0.48
TRIM13-204ENST00000420995 TRERF1Q96PN7 1200 aa18.08■□□□□ 0.48
TRIM13-204ENST00000420995 PANX2Q96RD6 677 aa18.08■□□□□ 0.48
TRIM13-204ENST00000420995 WNT7AO00755 349 aa18.07■□□□□ 0.48
TRIM13-204ENST00000420995 TXLNAP40222 546 aa18.07■□□□□ 0.48
TRIM13-204ENST00000420995 CEP131Q9UPN4 1083 aa18.07■□□□□ 0.48
TRIM13-204ENST00000420995 CHMP4BP1P59074 171 aa18.07■□□□□ 0.48
TRIM13-204ENST00000420995 PPFIBP1Q86W92 1011 aa18.07■□□□□ 0.48
TRIM13-204ENST00000420995 CARD10Q9BWT7 1032 aa18.07■□□□□ 0.48
TRIM13-204ENST00000420995 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms