RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 INTS3Q68E01 1043 aaKnown RBP6.52□□□□□ -1.37
LINC01646-201ENST00000420522 SLC6A19Q695T7 634 aa6.52□□□□□ -1.37
LINC01646-201ENST00000420522 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.52□□□□□ -1.37
LINC01646-201ENST00000420522 NLRC3Q7RTR2 1065 aa6.52□□□□□ -1.37
LINC01646-201ENST00000420522 UBE3DQ7Z6J8 389 aa6.52□□□□□ -1.37
LINC01646-201ENST00000420522 TXNRD3Q86VQ6 643 aa6.52□□□□□ -1.37
LINC01646-201ENST00000420522 SLFN12Q8IYM2 578 aa6.52□□□□□ -1.37
LINC01646-201ENST00000420522 HNRNPLLQ8WVV9 542 aaKnown RBP6.52□□□□□ -1.37
LINC01646-201ENST00000420522 ACSS3Q9H6R3 686 aa6.52□□□□□ -1.37
LINC01646-201ENST00000420522 KLHL3Q9UH77 587 aa6.52□□□□□ -1.37
LINC01646-201ENST00000420522 KRBA1A5PL33 1030 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 TNFRSF10CO14798 259 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 GAS2O43903 313 aaKnown RBP6.51□□□□□ -1.37
LINC01646-201ENST00000420522 ACRP10323 421 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 USP11P51784 963 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 ARSHQ5FYA8 562 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 FAM13CQ8NE31 585 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 TRIM55Q9BYV6 548 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 TNKS2Q9H2K2 1166 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 ACTR10Q9NZ32 417 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
LINC01646-201ENST00000420522 R3HCC1Q9Y3T6 440 aaKnown RBP6.51□□□□□ -1.37
LINC01646-201ENST00000420522 A0A1W2PQH9 124 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 RNF225M0QZC1 329 aaPredicted RBP6.5□□□□□ -1.37
LINC01646-201ENST00000420522 RAB6AP20340 208 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 TTC6Q86TZ1 520 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC01646-201ENST00000420522 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
LINC01646-201ENST00000420522 DCAF5Q96JK2 942 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 MEGF10Q96KG7 1140 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 MYRFLQ96LU7 910 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 SLC9A7Q96T83 725 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 SEMA6CQ9H3T2 930 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 SSU72Q9NP77 194 aaKnown RBP6.5□□□□□ -1.37
LINC01646-201ENST00000420522 SIRPGQ9P1W8 387 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 STK17AQ9UEE5 414 aa6.5□□□□□ -1.37
LINC01646-201ENST00000420522 CST3P01034 146 aaPredicted RBP6.49□□□□□ -1.37
LINC01646-201ENST00000420522 CHRNA4P43681 627 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 PPP2R5EQ16537 467 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 SGO2Q562F6 1265 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 PRAMEF13Q5VWM6 474 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 CD163Q86VB7 1156 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 ARMC10Q8N2F6 343 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 MKL1Q969V6 931 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 UTP4Q969X6 686 aaKnown RBP6.49□□□□□ -1.37
LINC01646-201ENST00000420522 SSBP4Q9BWG4 385 aaPredicted RBP6.49□□□□□ -1.37
LINC01646-201ENST00000420522 YIPF2Q9BWQ6 316 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 FOXQ1Q9C009 403 aa6.49□□□□□ -1.37
LINC01646-201ENST00000420522 SHROOM4Q9ULL8 1493 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 RGS13O14921 159 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 U2SURPO15042 1029 aaKnown RBP6.48□□□□□ -1.37
LINC01646-201ENST00000420522 LRIG2O94898 1065 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 NFICP08651 508 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 BMP3P12645 472 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 RAG1P15918 1043 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 CCNFP41002 786 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 ZYXQ15942 572 aaKnown RBP6.48□□□□□ -1.37
LINC01646-201ENST00000420522 UNC5AQ6ZN44 842 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 ARMCX6Q7L4S7 300 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 FAM20CQ8IXL6 584 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 CELF2-AS1Q8N7Q2 184 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 DPH2Q9BQC3 489 aaPredicted RBP6.48□□□□□ -1.37
LINC01646-201ENST00000420522 ZSWIM4Q9H7M6 989 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 DAGLAQ9Y4D2 1042 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
LINC01646-201ENST00000420522 C1QTNF9BB2RNN3 333 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 MAP4P27816 1152 aaKnown RBP6.47□□□□□ -1.37
LINC01646-201ENST00000420522 MAP7Q14244 749 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 FXNQ16595 210 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 SEZ6L2Q6UXD5 910 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 NOP9Q86U38 636 aaKnown RBP6.47□□□□□ -1.37
LINC01646-201ENST00000420522 PHACTR4Q8IZ21 702 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 MFSD2AQ8NA29 543 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 MICAL1Q8TDZ2 1067 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 CYB5D2Q8WUJ1 264 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 CCDC74BQ96LY2 380 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 PSMG3-AS1Q96PY0 264 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 KIF2CQ99661 725 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 PIF1Q9H611 641 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 LTBP3Q9NS15 1303 aa6.47□□□□□ -1.37
LINC01646-201ENST00000420522 K7ELQ4 463 aaPredicted RBP6.46□□□□□ -1.38
LINC01646-201ENST00000420522 DYNC1LI2O43237 492 aaPredicted RBP6.46□□□□□ -1.38
LINC01646-201ENST00000420522 UBOX5O94941 541 aa6.46□□□□□ -1.38
LINC01646-201ENST00000420522 POLR2BP30876 1174 aaKnown RBP6.46□□□□□ -1.38
LINC01646-201ENST00000420522 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
LINC01646-201ENST00000420522 NFE2L2Q16236 605 aa6.46□□□□□ -1.38
LINC01646-201ENST00000420522 DDR2Q16832 855 aa6.46□□□□□ -1.38
LINC01646-201ENST00000420522 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
LINC01646-201ENST00000420522 CDK11AQ9UQ88 783 aaPredicted RBP6.46□□□□□ -1.38
LINC01646-201ENST00000420522 MSRB2Q9Y3D2 182 aa6.46□□□□□ -1.38
LINC01646-201ENST00000420522 FAM95CA0A1B0GW59 222 aa6.45□□□□□ -1.38
LINC01646-201ENST00000420522 DHX15O43143 795 aaKnown RBP6.45□□□□□ -1.38
LINC01646-201ENST00000420522 RXRBP28702 533 aa6.45□□□□□ -1.38
LINC01646-201ENST00000420522 KCNMA1Q12791 1236 aa6.45□□□□□ -1.38
LINC01646-201ENST00000420522 LRP10Q7Z4F1 713 aa6.45□□□□□ -1.38
LINC01646-201ENST00000420522 TMEM192Q8IY95 271 aa6.45□□□□□ -1.38
LINC01646-201ENST00000420522 BAHD1Q8TBE0 780 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms