RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TNNI2P48788 182 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 PICALMQ13492 652 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 ME3Q16798 604 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 USP50Q70EL3 339 aaPredicted RBP16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 SH3BP5LQ7L8J4 393 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 NKX2-3Q8TAU0 364 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 ZSCAN10Q96SZ4 725 aaPredicted RBP16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 LY9Q9HBG7 655 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 MKNK2Q9HBH9 465 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 SAP30BPQ9UHR5 308 aaKnown RBP16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 PITPNM2Q9BZ72 1349 aa16.76■□□□□ 0.27
SHMT1P1-201ENST00000419974 ERICH2A1L162 156 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 DDTLA6NHG4 134 aaPredicted RBP16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 FGD1P98174 961 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 KIF4BQ2VIQ3 1234 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 NBPF9Q3BBW0 867 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 EAPPQ56P03 285 aaPredicted RBP16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 ZNF444Q8N0Y2 327 aaPredicted RBP16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 NEDD1Q8NHV4 660 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 UBAC1Q9BSL1 405 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 CIZ1Q9ULV3 898 aaPredicted RBP16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 PPP2R3BQ9Y5P8 575 aa16.75■□□□□ 0.27
SHMT1P1-201ENST00000419974 PCNTO95613 3336 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 IFIT3O14879 490 aaKnown RBP16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 RANBP6O60518 1105 aaKnown RBP16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 PDIA3P30101 505 aaKnown RBP16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 EPS15P42566 896 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 EVX2Q03828 476 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 DYNLL2Q96FJ2 89 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 MAP3K14Q99558 947 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 ADARB2Q9NS39 739 aaKnown RBP16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 MYH1P12882 1939 aa16.74■□□□□ 0.27
SHMT1P1-201ENST00000419974 TSPY2A6NKD2 308 aa16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 SHMT1P34896 483 aa16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 TFAP4Q01664 338 aa16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 TMEM67Q5HYA8 995 aa16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 APOBEC3FQ8IUX4 373 aaKnown RBP16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 ENAHQ8N8S7 591 aaPredicted RBP16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 TNKSO95271 1327 aa16.73■□□□□ 0.27
SHMT1P1-201ENST00000419974 IGKV6D-41A0A0C4DH26 115 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 DHX16O60231 1041 aaKnown RBP16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 EGFRP00533 1210 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 CACNB3P54284 484 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 WTAPQ15007 396 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 SAMD7Q7Z3H4 446 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 ZC3H15Q8WU90 426 aaKnown RBP16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 IL17RBQ9NRM6 502 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 SYNPO2Q9UMS6 1093 aa16.72■□□□□ 0.27
SHMT1P1-201ENST00000419974 CLRN2A0PK11 232 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 PRDM1O75626 825 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 LARGE1O95461 756 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 CALM1P0DP23 149 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 CALM2P0DP24 149 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 CALM3P0DP25 149 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 SLC4A3P48751 1232 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 TCP10Q12799 353 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 RCSD1Q6JBY9 416 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 HOOK2Q96ED9 719 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 TEPSINQ96N21 525 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 CSRNP1Q96S65 589 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 SLKQ9H2G2 1235 aaPredicted RBP16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 GINM1Q9NU53 330 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 HPS5Q9UPZ3 1129 aa16.71■□□□□ 0.27
SHMT1P1-201ENST00000419974 TMEM88BA6NKF7 163 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 DDAH1O94760 285 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 TBC1D10BQ4KMP7 808 aaPredicted RBP16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 SLC44A5Q8NCS7 719 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 SMARCC2Q8TAQ2 1214 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 KLF18A0A0U1RQI7 1052 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 CCDC196A0A1B0GTZ2 297 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 CCDC69A6NI79 296 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 ZBTB43O43298 467 aa16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 HSP90AA1P07900 732 aaKnown RBP16.7■□□□□ 0.26
SHMT1P1-201ENST00000419974 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms