RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 MSL3Q8N5Y2 521 aaKnown RBP8.12□□□□□ -1.11
TVP23C-202ENST00000419890 NECAB1Q8N987 351 aa8.12□□□□□ -1.11
TVP23C-202ENST00000419890 LINS1Q8NG48 757 aa8.12□□□□□ -1.11
TVP23C-202ENST00000419890 BRF1Q92994 677 aa8.12□□□□□ -1.11
TVP23C-202ENST00000419890 NEK1Q96PY6 1258 aa8.12□□□□□ -1.11
TVP23C-202ENST00000419890 DNAJC2Q99543 621 aaKnown RBP8.12□□□□□ -1.11
TVP23C-202ENST00000419890 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
TVP23C-202ENST00000419890 C1QTNF2Q9BXJ5 285 aa8.12□□□□□ -1.11
TVP23C-202ENST00000419890 PHAXQ9H814 394 aaKnown RBP8.12□□□□□ -1.11
TVP23C-202ENST00000419890 NRBP1Q9UHY1 535 aa8.12□□□□□ -1.11
TVP23C-202ENST00000419890 V9GYY5 206 aaPredicted RBP8.12□□□□□ -1.11
TVP23C-202ENST00000419890 MAP3K15Q6ZN16 1313 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 CBFA2T2O43439 604 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 TAF5LO75529 589 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 YEATS4O95619 227 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 CPA1P15085 419 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 ATP5JP18859 108 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 TUBB4BP68371 445 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 FGD1P98174 961 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 G3BP1Q13283 466 aaKnown RBP eCLIP8.11□□□□□ -1.11
TVP23C-202ENST00000419890 TTLL12Q14166 644 aaPredicted RBP8.11□□□□□ -1.11
TVP23C-202ENST00000419890 AKAP4Q5JQC9 854 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 MPRIPQ6WCQ1 1025 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 C11orf57Q6ZUT1 292 aaPredicted RBP8.11□□□□□ -1.11
TVP23C-202ENST00000419890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.11□□□□□ -1.11
TVP23C-202ENST00000419890 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 AACSQ86V21 672 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 DHX40Q8IX18 779 aaKnown RBP8.11□□□□□ -1.11
TVP23C-202ENST00000419890 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 TXLNBQ8N3L3 684 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 MRPS27Q92552 414 aaKnown RBP8.11□□□□□ -1.11
TVP23C-202ENST00000419890 FSD1Q9BTV5 496 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 DNAI1Q9UI46 699 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 LAMB4A4D0S4 1761 aa8.11□□□□□ -1.11
TVP23C-202ENST00000419890 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 EFCAB8A8MWE9 144 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 GRM8O00222 908 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 SPTLC1O15269 473 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 ZRANB2O95218 330 aaKnown RBP eCLIP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 GDF11O95390 407 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 PHKG2P15735 406 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 SFPQP23246 707 aaKnown RBP eCLIP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 ELF2Q15723 593 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 AMOTQ4VCS5 1084 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 CCDC158Q5M9N0 1113 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 JAKMIP3Q5VZ66 844 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 ADALQ6DHV7 355 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 ZNF530Q6P9A1 599 aaPredicted RBP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 BRAPQ7Z569 592 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 CCAR1Q8IX12 1150 aaKnown RBP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 ELOA2Q8IYF1 753 aaPredicted RBP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 KCNG4Q8TDN1 519 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 ZNF274Q96GC6 653 aaPredicted RBP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 DSCC1Q9BVC3 393 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 UBXN6Q9BZV1 441 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 PSD3Q9NYI0 1048 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 C9orf78Q9NZ63 289 aaPredicted RBP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 RTEL1Q9NZ71 1219 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 CHPF2Q9P2E5 772 aa8.1□□□□□ -1.11
TVP23C-202ENST00000419890 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.11
TVP23C-202ENST00000419890 SHANK3Q9BYB0 1731 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 NHSQ6T4R5 1651 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 BTAF1O14981 1849 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 AFDNP55196 1824 aaKnown RBP8.09□□□□□ -1.11
TVP23C-202ENST00000419890 SASH1O94885 1247 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 UPP2O95045 317 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 CDK11BP21127 795 aaKnown RBP8.09□□□□□ -1.11
TVP23C-202ENST00000419890 KCNQ4P56696 695 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 EVCP57679 992 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 ETF1P62495 437 aaKnown RBP8.09□□□□□ -1.11
TVP23C-202ENST00000419890 GPS2Q13227 327 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 ZRSR1Q15695 479 aaKnown RBP8.09□□□□□ -1.11
TVP23C-202ENST00000419890 C1orf141Q5JVX7 400 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 TMCO3Q6UWJ1 677 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 BPHLQ86WA6 291 aaPredicted RBP8.09□□□□□ -1.11
TVP23C-202ENST00000419890 FMR1NBQ8N0W7 255 aaPredicted RBP8.09□□□□□ -1.11
TVP23C-202ENST00000419890 NSUN7Q8NE18 718 aaKnown RBP8.09□□□□□ -1.11
TVP23C-202ENST00000419890 PPP1R13BQ96KQ4 1090 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 FAM227BQ96M60 508 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 MPHOSPH8Q99549 860 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 COPRSQ9NQ92 184 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 POLR3EQ9NVU0 708 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 STK32BQ9NY57 414 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 SCN11AQ9UI33 1791 aa8.09□□□□□ -1.11
TVP23C-202ENST00000419890 CARMIL3Q8ND23 1372 aa8.09□□□□□ -1.12
TVP23C-202ENST00000419890 C5P01031 1676 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 WDR19Q8NEZ3 1342 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 ARFGEF2Q9Y6D5 1785 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 FAM237AA0A1B0GTK4 181 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 USP27XA6NNY8 438 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 ZSCAN12O43309 604 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 PNMA6AP0CW24 399 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms