RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 POLR3DP05423 398 aaPredicted RBP15.04■□□□□ -0
LINC00642-201ENST00000419459 SH3BP5LQ7L8J4 393 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 TMEM87AQ8NBN3 555 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 ARPP21Q9UBL0 812 aaPredicted RBP15.04■□□□□ -0
LINC00642-201ENST00000419459 HACL1Q9UJ83 578 aa15.04■□□□□ -0
LINC00642-201ENST00000419459 MYH8P13535 1937 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 TPM3P06753 285 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
LINC00642-201ENST00000419459 DNTTIP2Q5QJE6 756 aaKnown RBP15.03■□□□□ -0
LINC00642-201ENST00000419459 C12orf60Q5U649 245 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 ANGEL2Q5VTE6 544 aaKnown RBP15.03■□□□□ -0
LINC00642-201ENST00000419459 GIMAP6Q6P9H5 292 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 KCNB2Q92953 911 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 IDI2Q9BXS1 227 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 TOMM22Q9NS69 142 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 GGA3Q9NZ52 723 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 TMOD2Q9NZR1 351 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 CNTNAP1P78357 1384 aa15.03■□□□□ -0
LINC00642-201ENST00000419459 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
LINC00642-201ENST00000419459 POTECB2RU33 542 aa15.02■□□□□ -0
LINC00642-201ENST00000419459 NEK4P51957 841 aa15.02■□□□□ -0
LINC00642-201ENST00000419459 NOLC1Q14978 699 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00642-201ENST00000419459 DLK2Q6UY11 383 aa15.02■□□□□ -0
LINC00642-201ENST00000419459 RNF214Q8ND24 703 aa15.02■□□□□ -0
LINC00642-201ENST00000419459 L3MBTL3Q96JM7 780 aaPredicted RBP15.02■□□□□ -0
LINC00642-201ENST00000419459 LRRC2Q9BYS8 371 aa15.02■□□□□ -0
LINC00642-201ENST00000419459 WDR33Q9C0J8 1336 aaKnown RBP15.02□□□□□ -0.01
LINC00642-201ENST00000419459 B4E1Z4 1266 aa15.02□□□□□ -0.01
LINC00642-201ENST00000419459 KIF20AO95235 890 aa15.02□□□□□ -0.01
LINC00642-201ENST00000419459 ZSCAN20P17040 1043 aaPredicted RBP15.02□□□□□ -0.01
LINC00642-201ENST00000419459 PRAMEF18Q5VWM3 479 aa15.02□□□□□ -0.01
LINC00642-201ENST00000419459 LARP6Q9BRS8 491 aaKnown RBP15.02□□□□□ -0.01
LINC00642-201ENST00000419459 ADARB2Q9NS39 739 aaKnown RBP15.02□□□□□ -0.01
LINC00642-201ENST00000419459 KIF3AQ9Y496 699 aa15.02□□□□□ -0.01
LINC00642-201ENST00000419459 SCN4AP35499 1836 aa15.01□□□□□ -0.01
LINC00642-201ENST00000419459 POTEIP0CG38 1075 aa15.01□□□□□ -0.01
LINC00642-201ENST00000419459 POTEJP0CG39 1038 aa15.01□□□□□ -0.01
LINC00642-201ENST00000419459 EPHX2P34913 555 aa15.01□□□□□ -0.01
LINC00642-201ENST00000419459 EAPPQ56P03 285 aaPredicted RBP15.01□□□□□ -0.01
LINC00642-201ENST00000419459 AKNAD1Q5T1N1 836 aa15.01□□□□□ -0.01
LINC00642-201ENST00000419459 NOL8Q76FK4 1167 aaKnown RBP15.01□□□□□ -0.01
LINC00642-201ENST00000419459 SBK1Q52WX2 424 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 MFSD6Q6ZSS7 791 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 NEK1Q96PY6 1258 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 CSRNP1Q96S65 589 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 WDR90Q96KV7 1748 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 RASA3Q14644 834 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 TSGA10IPQ3SY00 556 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 CCDC183Q5T5S1 534 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 AMOTL1Q8IY63 956 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 ANAPC4Q9UJX5 808 aa15□□□□□ -0.01
LINC00642-201ENST00000419459 KDM4AO75164 1064 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 STAG1Q8WVM7 1258 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 ZKSCAN3Q9BRR0 538 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 DNAJC18Q9H819 358 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 FAM47AQ5JRC9 791 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 RUFY3Q7L099 469 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 RALYLQ86SE5 291 aaKnown RBP14.99□□□□□ -0.01
LINC00642-201ENST00000419459 DEFB129Q9H1M3 183 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 TAF1DQ9H5J8 278 aaPredicted RBP14.99□□□□□ -0.01
LINC00642-201ENST00000419459 FZD1Q9UP38 647 aa14.99□□□□□ -0.01
LINC00642-201ENST00000419459 RANBP6O60518 1105 aaKnown RBP14.98□□□□□ -0.01
LINC00642-201ENST00000419459 ENTPD3O75355 529 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 KRT32Q14532 448 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 SHROOM1Q2M3G4 852 aaPredicted RBP14.98□□□□□ -0.01
LINC00642-201ENST00000419459 CYB5R4Q7L1T6 521 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 MIGA2Q7L4E1 593 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 ZNF710Q8N1W2 664 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 NCOA7Q8NI08 942 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 RRAGCQ9HB90 399 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 ZSWIM6Q9HCJ5 1215 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 GPHNQ9NQX3 736 aaPredicted RBP14.98□□□□□ -0.01
LINC00642-201ENST00000419459 ZSWIM5Q9P217 1185 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 SERPINB13Q9UIV8 391 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 ATRNL1Q5VV63 1379 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 ROBO3Q96MS0 1386 aa14.98□□□□□ -0.01
LINC00642-201ENST00000419459 MMP14P50281 582 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 ANTXR2P58335 489 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 TRDNQ13061 729 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 TTC6Q86TZ1 520 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 MB21D2Q8IYB1 491 aaPredicted RBP14.97□□□□□ -0.01
LINC00642-201ENST00000419459 FAM151AQ8WW52 585 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 CYP46A1Q9Y6A2 500 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 NMT2O60551 498 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 HLA-DOAP06340 250 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 RPS6KB1P23443 525 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 CDK8P49336 464 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 GABPAQ06546 454 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 PDE4BQ07343 736 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
LINC00642-201ENST00000419459 MKNK2Q9HBH9 465 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 PI4KBQ9UBF8 816 aa14.97□□□□□ -0.01
LINC00642-201ENST00000419459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.97□□□□□ -0.01
LINC00642-201ENST00000419459 IQCA1LA6NCM1 817 aa14.96□□□□□ -0.01
LINC00642-201ENST00000419459 ADM5C9JUS6 153 aa14.96□□□□□ -0.01
LINC00642-201ENST00000419459 PSMA5P28066 241 aa14.96□□□□□ -0.01
LINC00642-201ENST00000419459 TNFAIP1Q13829 316 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms