RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 BTDP43251 543 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 FKBP1AP62942 108 aaKnown RBP10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 EVX2Q03828 476 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 SLC15A2Q16348 729 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 ANO1Q5XXA6 986 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 ADALQ6DHV7 355 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 RCSD1Q6JBY9 416 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 MPNDQ8N594 471 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 BICD2Q8TD16 824 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 SLC26A6Q9BXS9 759 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 CNTNAP5Q8WYK1 1306 aa10.5□□□□□ -0.73
LINCMD1-201ENST00000418518 ARFGEF1Q9Y6D6 1849 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 BRCA1P38398 1863 aaKnown RBP10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 FAM237AA0A1B0GTK4 181 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 CTAGE5O15320 804 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 PPP6R2O75170 966 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 NR1I2O75469 434 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 PRDM1O75626 825 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 CCDC192P0DO97 292 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 USP5P45974 858 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 FAM160A1Q05DH4 1040 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 TRIM29Q14134 588 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 SLC39A14Q15043 492 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 PTPAQ15257 358 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 HS1BP3Q53T59 392 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 AXDND1Q5T1B0 1012 aaPredicted RBP10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 C16orf86Q6ZW13 317 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 DGKHQ86XP1 1220 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 AMOTL1Q8IY63 956 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 ANP32BQ92688 251 aaKnown RBP10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 EYA3Q99504 573 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 FOXP1Q9H334 677 aaPredicted RBP10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 GOLPH3LQ9H4A5 285 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 GJB4Q9NTQ9 266 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 PCDHA7Q9UN72 937 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 DAGLAQ9Y4D2 1042 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 FLT1P17948 1338 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 MYO3BQ8WXR4 1341 aa10.49□□□□□ -0.73
LINCMD1-201ENST00000418518 SPTLC2O15270 562 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 POLR3DP05423 398 aaPredicted RBP10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 RASA1P20936 1047 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 NOVP48745 357 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 STK38Q15208 465 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 PKN1Q16512 942 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 DPP8Q6V1X1 898 aaPredicted RBP10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 CCDC73Q6ZRK6 1079 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 NOSTRINQ8IVI9 506 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 CCAR1Q8IX12 1150 aaKnown RBP10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 TEX11Q8IYF3 940 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 FMR1NBQ8N0W7 255 aaPredicted RBP10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 CERS5Q8N5B7 392 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 TGFBRAP1Q8WUH2 860 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 NUP133Q8WUM0 1156 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 MRPS27Q92552 414 aaKnown RBP10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 MRIQ9BWK5 157 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 TNMDQ9H2S6 317 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 ZNF287Q9HBT7 754 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 STK32BQ9NY57 414 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 CLIC4Q9Y696 253 aa10.48□□□□□ -0.73
LINCMD1-201ENST00000418518 TSPY2A6NKD2 308 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 CAVIN2O95810 425 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 GTF2IP78347 998 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 TYRO3Q06418 890 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 SAFBQ15424 915 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 EZH2Q15910 746 aaKnown RBP10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 FAM47AQ5JRC9 791 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 CC2D2BQ6DHV5 1058 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 HHIPL2Q6UWX4 724 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 PODNQ7Z5L7 613 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 C2CD5Q86YS7 1000 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 DIS3L2Q8IYB7 885 aaKnown RBP10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 FAM177A1Q8N128 213 aaPredicted RBP10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 FAM43AQ8N2R8 423 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 JMYQ8N9B5 988 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 FSIP1Q8NA03 581 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 C7orf43Q8WVR3 580 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 ZC3H12CQ9C0D7 883 aaKnown RBP10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 IL17RBQ9NRM6 502 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
LINCMD1-201ENST00000418518 H0YIN7 160 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 NMT2O60551 498 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 PLEKHA8P1O95397 391 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 XBP1P17861 261 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 CMA1P23946 247 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 KIF5BP33176 963 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 ME1P48163 572 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 PLCD1P51178 756 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 HDLBPQ00341 1268 aaKnown RBP10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 CEBPZQ03701 1054 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms