RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 RRP12Q5JTH9 1297 aaKnown RBP11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 ENAHQ8N8S7 591 aaPredicted RBP11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 TCEANC2Q96MN5 208 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 ZSCAN16Q9H4T2 348 aaPredicted RBP11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 MYOZ2Q9NPC6 264 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 SCN9AQ15858 1988 aa11.81□□□□□ -0.52
HMGA1P6-201ENST00000418454 DDX60LQ5H9U9 1706 aaKnown RBP11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 LAMB1P07942 1786 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 GOLGA8BA8MQT2 603 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 H7C1D1 291 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 SYT1P21579 422 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 ST3GAL1Q11201 340 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 TROAPQ12815 778 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 LARP1BQ659C4 914 aaKnown RBP11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 NECAB1Q8N987 351 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 FAM184AQ8NB25 1140 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 SPRYD3Q8NCJ5 442 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 MKL1Q969V6 931 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 LRRC2Q9BYS8 371 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 COL4A5P29400 1685 aa11.8□□□□□ -0.52
HMGA1P6-201ENST00000418454 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 IGKV6D-41A0A0C4DH26 115 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 DDX11L8A8MPP1 907 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 GOLGA6L22H0YM25 854 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 CYP2D6P10635 497 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 TOP1P11387 765 aaKnown RBP11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 NTRK3Q16288 839 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 RCSD1Q6JBY9 416 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 NOL8Q76FK4 1167 aaKnown RBP11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 TRIM22Q8IYM9 498 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 ZNF654Q8IZM8 581 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 TNPO1Q92973 898 aaKnown RBP11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 KAT14Q9H8E8 782 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
HMGA1P6-201ENST00000418454 GOLGA8AA7E2F4 631 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 WNT10BO00744 389 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 CTDNEP1O95476 244 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 NFIAQ12857 509 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 PICALMQ13492 652 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 RTN1Q16799 776 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 ANP32EQ9BTT0 268 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 KANSL2Q9H9L4 492 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 IL17RBQ9NRM6 502 aa11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
HMGA1P6-201ENST00000418454 NAV1Q8NEY1 1877 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 PTPDC1A2A3K4 754 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 PRPF3O43395 683 aaKnown RBP11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 PRDM1O75626 825 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 TTLL1O95922 423 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 SHMT1P34896 483 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 PRELPP51888 382 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 SSRP1Q08945 709 aaKnown RBP11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 STK3Q13188 491 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 TMEM179Q6ZVK1 233 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 TEX2Q8IWB9 1127 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 DYNLL2Q96FJ2 89 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 GPRC5DQ9NZD1 345 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 NYAP2Q9P242 653 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 MTMR6Q9Y217 621 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
HMGA1P6-201ENST00000418454 DEXIO95424 95 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 XBP1P17861 261 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 MCM4P33991 863 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 ADD1P35611 737 aaKnown RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 GMPSP49915 693 aaPredicted RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 RASSF7Q02833 373 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 CERKLQ49MI3 558 aaPredicted RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 FAM47AQ5JRC9 791 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZSCAN29Q8IWY8 852 aaPredicted RBP11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 FBXO18Q8NFZ0 1043 aa11.76□□□□□ -0.53
HMGA1P6-201ENST00000418454 NKX2-3Q8TAU0 364 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms