RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 PPP2R2CQ9Y2T4 447 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 MROH5Q6ZUA9 1318 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-202ENST00000418310 VWA3AA6NCI4 1184 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-202ENST00000418310 SHISA4Q96DD7 197 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
LIMK1-202ENST00000418310 KIF2AO00139 706 aaPredicted RBP13.59□□□□□ -0.23
LIMK1-202ENST00000418310 PES1O00541 588 aaKnown RBP13.59□□□□□ -0.23
LIMK1-202ENST00000418310 SOS2Q07890 1332 aaPredicted RBP13.59□□□□□ -0.23
LIMK1-202ENST00000418310 DEXIO95424 95 aa13.59□□□□□ -0.23
LIMK1-202ENST00000418310 PTPREP23469 700 aa13.59□□□□□ -0.23
LIMK1-202ENST00000418310 CRKLP46109 303 aaKnown RBP13.59□□□□□ -0.23
LIMK1-202ENST00000418310 WASF1Q92558 559 aa13.59□□□□□ -0.23
LIMK1-202ENST00000418310 EEF2KMTQ96G04 330 aa13.59□□□□□ -0.23
LIMK1-202ENST00000418310 MED15Q96RN5 788 aa13.59□□□□□ -0.23
LIMK1-202ENST00000418310 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
LIMK1-202ENST00000418310 WDR19Q8NEZ3 1342 aa13.59□□□□□ -0.23
LIMK1-202ENST00000418310 AKAP11Q9UKA4 1901 aa13.59□□□□□ -0.23
LIMK1-202ENST00000418310 SOWAHDA6NJG2 315 aa13.58□□□□□ -0.23
LIMK1-202ENST00000418310 TFRCP02786 760 aaKnown RBP13.58□□□□□ -0.23
LIMK1-202ENST00000418310 SYCP1Q15431 976 aa13.58□□□□□ -0.23
LIMK1-202ENST00000418310 REXO1L1PQ8IX06 675 aa13.58□□□□□ -0.23
LIMK1-202ENST00000418310 MAGEB6P1A0A0J9YX57 407 aa13.58□□□□□ -0.24
LIMK1-202ENST00000418310 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
LIMK1-202ENST00000418310 RILPL1Q5EBL4 403 aa13.58□□□□□ -0.24
LIMK1-202ENST00000418310 IFIT1BQ5T764 474 aaKnown RBP13.58□□□□□ -0.24
LIMK1-202ENST00000418310 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
LIMK1-202ENST00000418310 PLIN2Q99541 437 aa13.58□□□□□ -0.24
LIMK1-202ENST00000418310 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
LIMK1-202ENST00000418310 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.24
LIMK1-202ENST00000418310 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
LIMK1-202ENST00000418310 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
LIMK1-202ENST00000418310 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.58□□□□□ -0.24
LIMK1-202ENST00000418310 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
LIMK1-202ENST00000418310 TRIM75PA6NK02 468 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 ZNF34Q8IZ26 560 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
LIMK1-202ENST00000418310 KLRK1P26718 216 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 CASQ1P31415 396 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 SPECC1LQ69YQ0 1117 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-202ENST00000418310 CCDC12Q8WUD4 166 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-202ENST00000418310 ADAMTS3O15072 1205 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 MCM7P33993 719 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-202ENST00000418310 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 TC2NQ8N9U0 490 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 STAG1Q8WVM7 1258 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 ESR2Q92731 530 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 L2HGDHQ9H9P8 463 aa13.57□□□□□ -0.24
LIMK1-202ENST00000418310 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
LIMK1-202ENST00000418310 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
LIMK1-202ENST00000418310 USP17L12C9JPN9 530 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 USP17L21D6R901 530 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 CYP2D6P10635 497 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-202ENST00000418310 SLC51AQ86UW1 340 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 MORC2Q9Y6X9 1032 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-202ENST00000418310 CCDC196A0A1B0GTZ2 297 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
LIMK1-202ENST00000418310 UTP14CQ5TAP6 766 aaKnown RBP13.56□□□□□ -0.24
LIMK1-202ENST00000418310 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 ZNF512BQ96KM6 892 aaPredicted RBP13.56□□□□□ -0.24
LIMK1-202ENST00000418310 TRERF1Q96PN7 1200 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
LIMK1-202ENST00000418310 CTNND2Q9UQB3 1225 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 DCCP43146 1447 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
LIMK1-202ENST00000418310 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 ZSCAN12O43309 604 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 ALX1Q15699 326 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 TMEM139Q8IV31 216 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 CCDC87Q9NVE4 849 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 PARP3Q9Y6F1 533 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 GOLGB1Q14789 3259 aaKnown RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 SPEF2Q9C093 1822 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 VPS16Q9H269 839 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 FOXP1Q9H334 677 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 KRT2P35908 639 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 ITPK1Q13572 414 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 CATIPQ7Z7H3 387 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 IGSF22Q8N9C0 903 aa13.55□□□□□ -0.24
LIMK1-202ENST00000418310 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
LIMK1-202ENST00000418310 MYH7P12883 1935 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 UBR2Q8IWV8 1755 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms