RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 IBTKQ9P2D0 1353 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-205ENST00000418258 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 CD19P15391 556 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TUBB4BP68371 445 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 ZNF365Q70YC5 407 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 SPATA5Q8NB90 893 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 LPIN2Q92539 896 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 DDX17Q92841 729 aaKnown RBP12.48□□□□□ -0.41
PTCH1-205ENST00000418258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTCH1-205ENST00000418258 PALM3A6NDB9 673 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-205ENST00000418258 LZTS2Q9BRK4 669 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 STIM2Q9P246 746 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 TACC3Q9Y6A5 838 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 GTF2IP78347 998 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 APPBP2Q92624 585 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 BAG1Q99933 345 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-205ENST00000418258 ERCC3P19447 782 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 HERC4Q5GLZ8 1057 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-205ENST00000418258 TBC1D22AQ8WUA7 517 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 USP40Q9NVE5 1235 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 NOLC1Q14978 699 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTCH1-205ENST00000418258 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-205ENST00000418258 ARID4AP29374 1257 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-205ENST00000418258 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 SYNRGQ9UMZ2 1314 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 OATP04181 439 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 KRT222Q8N1A0 295 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 KIF1BO60333 1816 aa12.47□□□□□ -0.41
PTCH1-205ENST00000418258 CHMLP26374 656 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 CCDC89Q8N998 374 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 KDM5AP29375 1690 aaKnown RBP12.46□□□□□ -0.41
PTCH1-205ENST00000418258 EXOC3O60645 756 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 IVLP07476 585 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 DYMQ7RTS9 669 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 MAP3K19Q56UN5 1328 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 RAD50Q92878 1312 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 GAS7O60861 476 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 YARSP54577 528 aaKnown RBP12.46□□□□□ -0.41
PTCH1-205ENST00000418258 TTC38Q5R3I4 469 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 ATL3Q6DD88 541 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 VPS18Q9P253 973 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.41
PTCH1-205ENST00000418258 VIMP08670 466 aaKnown RBP12.46□□□□□ -0.41
PTCH1-205ENST00000418258 GNPTABQ3T906 1256 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 MAP3K1Q13233 1512 aa12.46□□□□□ -0.41
PTCH1-205ENST00000418258 VAMP4O75379 141 aa12.46□□□□□ -0.42
PTCH1-205ENST00000418258 IFRD2Q12894 506 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-205ENST00000418258 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.42
PTCH1-205ENST00000418258 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.42
PTCH1-205ENST00000418258 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.42
PTCH1-205ENST00000418258 UTP14CQ5TAP6 766 aaKnown RBP12.46□□□□□ -0.42
PTCH1-205ENST00000418258 GTF3C6Q969F1 213 aa12.46□□□□□ -0.42
PTCH1-205ENST00000418258 DCTPP1Q9H773 170 aa12.46□□□□□ -0.42
PTCH1-205ENST00000418258 PHACTR3Q96KR7 559 aa12.46□□□□□ -0.42
PTCH1-205ENST00000418258 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 CIB2O75838 187 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 MYL5Q02045 173 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 PLCB4Q15147 1175 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 IGSF22Q8N9C0 903 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 PHKBQ93100 1093 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 SLC27A2O14975 620 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 DEPTORQ8TB45 409 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 TTC36A6NLP5 189 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 STMN2Q93045 179 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 KCNH3Q9ULD8 1083 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 ZNF532Q9HCE3 1301 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 C4orf50Q6ZRC1 276 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTCH1-205ENST00000418258 CAPN9O14815 690 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 CAPN2P17655 700 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTCH1-205ENST00000418258 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 ST7Q9NRC1 585 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 PAK1Q13153 545 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 MMS19Q96T76 1030 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 NCOA5Q9HCD5 579 aaKnown RBP12.45□□□□□ -0.42
PTCH1-205ENST00000418258 ARHGEF10O15013 1369 aa12.45□□□□□ -0.42
PTCH1-205ENST00000418258 GOLGA6CA6NDK9 693 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 GOLGA6BA6NDN3 693 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 GOLGA6DP0CG33 693 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-205ENST00000418258 PLEKHM2Q8IWE5 1019 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 RDH13Q8NBN7 331 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 CHURC1Q8WUH1 139 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 GOLGA6AQ9NYA3 693 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
PTCH1-205ENST00000418258 CPA1P15085 419 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 266.5 ms