RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 FOXP4Q8IVH2 680 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CSRNP2Q9H175 543 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 TPM1P09493 284 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 SPECC1LQ69YQ0 1117 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 TMEM232C9JQI7 657 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GRAMD1CQ8IYS0 662 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GRIN1Q05586 938 aa13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GOLGA8FQ08AF8 430 aa13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GOLGA8DPQ0D2H9 430 aa13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ZNF771Q7L3S4 317 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ENOX1Q8TC92 643 aaKnown RBP13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 GNG11P61952 73 aa13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 ERCC6LQ2NKX8 1250 aa13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 SRRTQ9BXP5 876 aaKnown RBP13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 RASSF8Q8NHQ8 419 aa13.34□□□□□ -0.27
CSPG4P3Y-201ENST00000418188 CAMTA2O94983 1202 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PDE4BQ07343 736 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 CASQ1P31415 396 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 NLRP5P59047 1200 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 DMTNQ08495 405 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ARHGAP29Q52LW3 1261 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ANKRD20A12PQ8NF67 263 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 FERMT2Q96AC1 680 aa13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 MYH7P12883 1935 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 STX10O60499 249 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 NTSR2O95665 410 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ADKP55263 362 aaKnown RBP13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ZNF174Q15697 407 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 FBXO38Q6PIJ6 1188 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 CRNKL1Q9BZJ0 848 aaKnown RBP13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 HSD3B7Q9H2F3 369 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PPP2R2CQ9Y2T4 447 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 USP17L12C9JPN9 530 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 USP17L21D6R901 530 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ERCC5P28715 1186 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PLCD1P51178 756 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 STX17P56962 302 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ZHX1Q9UKY1 873 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 TACC3Q9Y6A5 838 aa13.32□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 CYP2D7A0A087X1C5 515 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 VWA3AA6NCI4 1184 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PCP11498 1178 aaKnown RBP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 TXLNAP40222 546 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 CPLX3Q8WVH0 158 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 AKAP11Q9UKA4 1901 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 MORC3Q14149 939 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 EPSTI1Q96J88 318 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 CTAGE1Q96RT6 745 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 SAMSN1Q9NSI8 373 aaKnown RBP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 SLFN14P0C7P3 912 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 BMP6P22004 513 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 MDM2Q00987 491 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 BMS1Q14692 1282 aaKnown RBP13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 TTC38Q5R3I4 469 aa13.31□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 TMCO3Q6UWJ1 677 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ADGRA1Q86SQ6 560 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 BRIP1Q9BX63 1249 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 TMX1Q9H3N1 280 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 AKR1B15C9JRZ8 316 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 IGSF3O75054 1194 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 KIF5BP33176 963 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 IQUBQ8NA54 791 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 LRP6O75581 1613 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 SEC23AQ15436 765 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
CSPG4P3Y-201ENST00000418188 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms