RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 AGMOQ6ZNB7 445 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 XAGE3Q8WTP9 111 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 MIPEPQ99797 713 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 FOXQ1Q9C009 403 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 WNT10AQ9GZT5 417 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 MKNK2Q9HBH9 465 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 PRDM5Q9NQX1 630 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 VAV3Q9UKW4 847 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 PLAGL2Q9UPG8 496 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 SNCAIPQ9Y6H5 919 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 THOC2Q8NI27 1593 aaKnown RBP5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 CUX2O14529 1486 aa5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 POLA1P09884 1462 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P20-201ENST00000417997 ERICH3Q5RHP9 1530 aa5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 CUL7Q14999 1698 aa5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 LOC105371045A0A1W2PR82 267 aa5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 TFE3P19532 575 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 TAGLNQ01995 201 aaKnown RBP5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 NKG7Q16617 165 aa5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 TMC4Q7Z404 712 aa5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 HID1Q8IV36 788 aa5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 TLR6Q9Y2C9 796 aa5.95□□□□□ -1.46
HMGB3P20-201ENST00000417997 WDR62O43379 1518 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 FAM155AB1AL88 458 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 SORBS3O60504 671 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 IKZF1Q13422 519 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 ZNF792Q3KQV3 632 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 FBXO33Q7Z6M2 555 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 PI4K2BQ8TCG2 481 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 ABCA5Q8WWZ7 1642 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 ABCA10Q8WWZ4 1543 aa5.94□□□□□ -1.46
HMGB3P20-201ENST00000417997 IGF2BP3O00425 579 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 SLITRK5O94991 958 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 EOMESO95936 686 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 PGRP06401 933 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 CTSHP09668 335 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 RLBP1P12271 317 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 FUT4P22083 530 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 TXKP42681 527 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 SLBPQ14493 270 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 TSNAXIP1Q2TAA8 658 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 ANGEL2Q5VTE6 544 aaKnown RBP5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 PRAMEF13Q5VWM6 474 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 CBLL1Q75N03 491 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 FAM214BQ7L5A3 538 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 WFDC3Q8IUB2 231 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 CRELD1Q96HD1 420 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 DPH2Q9BQC3 489 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 RC3H2Q9HBD1 1191 aaKnown RBP5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 CTTNBP2Q8WZ74 1663 aa5.93□□□□□ -1.46
HMGB3P20-201ENST00000417997 TARBP1Q13395 1621 aaKnown RBP5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 RAD54L2Q9Y4B4 1467 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 BPNT1O95861 308 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 CBX7O95931 251 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 ST13P50502 369 aaKnown RBP5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 SFRP5Q5T4F7 317 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 CDKAL1Q5VV42 579 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 LETMD1Q6P1Q0 360 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 SPACA3Q8IXA5 215 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 MFSD2AQ8NA29 543 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 PHC3Q8NDX5 983 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 NOC4LQ9BVI4 516 aaKnown RBP5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 MAPK8IP1Q9UQF2 711 aa5.92□□□□□ -1.46
HMGB3P20-201ENST00000417997 GFRA2O00451 464 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 CST3P01034 146 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 ERCC3P19447 782 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 ITGAEP38570 1179 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 RPL6Q02878 288 aaKnown RBP5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 PDE4BQ07343 736 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 NKPD1Q17RQ9 610 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 RELL1Q8IUW5 271 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 MFSD4AQ8N468 514 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 RIN3Q8TB24 985 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 ASB11Q8WXH4 323 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 ASIC4Q96FT7 647 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 TNKS2Q9H2K2 1166 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 PRDM7Q9NQW5 492 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 MBNL3Q9NUK0 354 aaKnown RBP5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 ADAMTS6Q9UKP5 1117 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 SNX11Q9Y5W9 270 aa5.91□□□□□ -1.46
HMGB3P20-201ENST00000417997 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 PRR33A8MZF0 331 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 BIN1O00499 593 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 RNASE1P07998 156 aaKnown RBP5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 JUNBP17275 347 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 GBP2P32456 591 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 CLCN7P51798 805 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 ZP2Q05996 745 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 BNC2Q6ZN30 1099 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 CDH24Q86UP0 819 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 TMEM87BQ96K49 555 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 BCL2L13Q9BXK5 485 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 TJP2Q9UDY2 1190 aa5.9□□□□□ -1.46
HMGB3P20-201ENST00000417997 USP31Q70CQ4 1352 aa5.9□□□□□ -1.47
HMGB3P20-201ENST00000417997 TNIKQ9UKE5 1360 aa5.9□□□□□ -1.47
HMGB3P20-201ENST00000417997 CEP162Q5TB80 1403 aa5.9□□□□□ -1.47
HMGB3P20-201ENST00000417997 RAPGEF2Q9Y4G8 1499 aa5.9□□□□□ -1.47
HMGB3P20-201ENST00000417997 EIF4G3O43432 1585 aaKnown RBP5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms