RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 ANKRD13CQ8N6S4 541 aa22.36■■□□□ 1.17
VPS16-204ENST00000417508 SLAIN1Q8ND83 568 aa22.36■■□□□ 1.17
VPS16-204ENST00000417508 NKX2-3Q8TAU0 364 aa22.36■■□□□ 1.17
VPS16-204ENST00000417508 SERPINB13Q9UIV8 391 aa22.36■■□□□ 1.17
VPS16-204ENST00000417508 LOC285556D6RIA3 1793 aa22.35■■□□□ 1.17
VPS16-204ENST00000417508 MAGEB6P1A0A0J9YX57 407 aa22.35■■□□□ 1.17
VPS16-204ENST00000417508 USP17L10C9JJH3 530 aa22.35■■□□□ 1.17
VPS16-204ENST00000417508 TNPO2O14787 897 aaKnown RBP22.35■■□□□ 1.17
VPS16-204ENST00000417508 IRF5Q13568 498 aa22.35■■□□□ 1.17
VPS16-204ENST00000417508 TATDN1Q6P1N9 297 aa22.35■■□□□ 1.17
VPS16-204ENST00000417508 COA7Q96BR5 231 aa22.35■■□□□ 1.17
VPS16-204ENST00000417508 RIOK1Q9BRS2 568 aaKnown RBP22.35■■□□□ 1.17
VPS16-204ENST00000417508 DOCK3Q8IZD9 2030 aa22.35■■□□□ 1.17
VPS16-204ENST00000417508 PDE6AP16499 860 aa22.34■■□□□ 1.17
VPS16-204ENST00000417508 CAPN2P17655 700 aa22.34■■□□□ 1.17
VPS16-204ENST00000417508 PXYLP1Q8TE99 480 aa22.34■■□□□ 1.17
VPS16-204ENST00000417508 ASCC2Q9H1I8 757 aaPredicted RBP22.34■■□□□ 1.17
VPS16-204ENST00000417508 BIN2Q9UBW5 565 aaPredicted RBP22.34■■□□□ 1.17
VPS16-204ENST00000417508 ZBTB21Q9ULJ3 1066 aa22.34■■□□□ 1.17
VPS16-204ENST00000417508 ATP5JP18859 108 aa22.33■■□□□ 1.17
VPS16-204ENST00000417508 JAG1P78504 1218 aa22.33■■□□□ 1.17
VPS16-204ENST00000417508 MTMR2Q13614 643 aa22.33■■□□□ 1.17
VPS16-204ENST00000417508 CRNKL1Q9BZJ0 848 aaKnown RBP22.33■■□□□ 1.17
VPS16-204ENST00000417508 GABRQQ9UN88 632 aa22.33■■□□□ 1.17
VPS16-204ENST00000417508 GOLIM4O00461 696 aa22.32■■□□□ 1.16
VPS16-204ENST00000417508 ADCY3O60266 1144 aa22.32■■□□□ 1.16
VPS16-204ENST00000417508 GDF11O95390 407 aa22.32■■□□□ 1.16
VPS16-204ENST00000417508 MYCP01106 439 aaPredicted RBP22.32■■□□□ 1.16
VPS16-204ENST00000417508 FLT3LGP49771 235 aa22.32■■□□□ 1.16
VPS16-204ENST00000417508 IRX3P78415 501 aaPredicted RBP22.32■■□□□ 1.16
VPS16-204ENST00000417508 DNAJC2Q99543 621 aaKnown RBP22.32■■□□□ 1.16
VPS16-204ENST00000417508 TAOK2Q9UL54 1235 aa22.32■■□□□ 1.16
VPS16-204ENST00000417508 GJB1P08034 283 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 MTFR1Q15390 333 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 CERKLQ49MI3 558 aaPredicted RBP22.31■■□□□ 1.16
VPS16-204ENST00000417508 USP17L2Q6R6M4 530 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 GCC1Q96CN9 775 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 LRRCC1Q9C099 1032 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 PAG1Q9NWQ8 432 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 MORF4L1Q9UBU8 362 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 CENPFP49454 3210 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 ZNF532Q9HCE3 1301 aa22.31■■□□□ 1.16
VPS16-204ENST00000417508 SLC34A2O95436 690 aa22.3■■□□□ 1.16
VPS16-204ENST00000417508 GH2P01242 217 aa22.3■■□□□ 1.16
VPS16-204ENST00000417508 POLR3DP05423 398 aaPredicted RBP22.3■■□□□ 1.16
VPS16-204ENST00000417508 C20orf194Q5TEA3 1177 aa22.3■■□□□ 1.16
VPS16-204ENST00000417508 GTF3C2Q8WUA4 911 aaPredicted RBP22.3■■□□□ 1.16
VPS16-204ENST00000417508 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.3■■□□□ 1.165e-6■■■■■ 34.6
VPS16-204ENST00000417508 CABP5Q9NP86 173 aa22.3■■□□□ 1.16
VPS16-204ENST00000417508 TCRBV5S4A2TA0A5A2 114 aa22.29■■□□□ 1.16
VPS16-204ENST00000417508 CCL5P13501 91 aa22.29■■□□□ 1.16
VPS16-204ENST00000417508 GJA8P48165 433 aa22.29■■□□□ 1.16
VPS16-204ENST00000417508 P2RX7Q99572 595 aaKnown RBP22.29■■□□□ 1.16
VPS16-204ENST00000417508 HAUS7Q99871 368 aa22.29■■□□□ 1.16
VPS16-204ENST00000417508 RNF208Q9H0X6 261 aa22.29■■□□□ 1.16
VPS16-204ENST00000417508 BOLA2Q9H3K6 86 aa22.29■■□□□ 1.16
VPS16-204ENST00000417508 PLCD1P51178 756 aa22.28■■□□□ 1.16
VPS16-204ENST00000417508 USP14P54578 494 aa22.28■■□□□ 1.16
VPS16-204ENST00000417508 ABCB5Q2M3G0 1257 aa22.28■■□□□ 1.16
VPS16-204ENST00000417508 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
VPS16-204ENST00000417508 GPRC5AQ8NFJ5 357 aa22.27■■□□□ 1.16
VPS16-204ENST00000417508 C12orf42Q96LP6 360 aa22.27■■□□□ 1.16
VPS16-204ENST00000417508 EMILIN3Q9NT22 766 aa22.27■■□□□ 1.16
VPS16-204ENST00000417508 MCM9Q9NXL9 1143 aa22.27■■□□□ 1.16
VPS16-204ENST00000417508 ADD2P35612 726 aa22.26■■□□□ 1.15
VPS16-204ENST00000417508 HERVK_113P62684 666 aa22.26■■□□□ 1.15
VPS16-204ENST00000417508 GABPAQ06546 454 aa22.26■■□□□ 1.15
VPS16-204ENST00000417508 SHROOM1Q2M3G4 852 aaPredicted RBP22.26■■□□□ 1.15
VPS16-204ENST00000417508 KIAA1683Q9H0B3 1180 aa22.26■■□□□ 1.15
VPS16-204ENST00000417508 DCP1AQ9NPI6 582 aaPredicted RBP22.26■■□□□ 1.15
VPS16-204ENST00000417508 ATP8A2Q9NTI2 1148 aa22.26■■□□□ 1.15
VPS16-204ENST00000417508 SHMT1P34896 483 aa22.25■■□□□ 1.15
VPS16-204ENST00000417508 RAB3GAP1Q15042 981 aa22.25■■□□□ 1.15
VPS16-204ENST00000417508 UBE3CQ15386 1083 aa22.25■■□□□ 1.15
VPS16-204ENST00000417508 ZSCAN25Q6NSZ9 544 aa22.25■■□□□ 1.15
VPS16-204ENST00000417508 EDC3Q96F86 508 aaKnown RBP22.25■■□□□ 1.15
VPS16-204ENST00000417508 DCTPP1Q9H773 170 aa22.25■■□□□ 1.15
VPS16-204ENST00000417508 GJD2Q9UKL4 321 aa22.25■■□□□ 1.15
VPS16-204ENST00000417508 USP17L15C9J2P7 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L13C9JLJ4 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L11C9JVI0 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L18D6R9N7 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L22D6RA61 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L17D6RBQ6 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L19D6RCP7 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L20D6RJB6 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 SGPL1O95470 568 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 INHAP05111 366 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 ELNP15502 786 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 USP17L24Q0WX57 530 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 LCORLQ8N3X6 602 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 FEZ1Q99689 392 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 UNC93B1Q9H1C4 597 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 RBPJLQ9UBG7 517 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 SWAP70Q9UH65 585 aa22.24■■□□□ 1.15
VPS16-204ENST00000417508 MAPK4P31152 587 aa22.23■■□□□ 1.15
VPS16-204ENST00000417508 U2AF1L4Q8WU68 220 aaKnown RBP22.23■■□□□ 1.15
VPS16-204ENST00000417508 SHISA4Q96DD7 197 aa22.23■■□□□ 1.15
VPS16-204ENST00000417508 ECHDC1Q9NTX5 307 aa22.23■■□□□ 1.15
VPS16-204ENST00000417508 SDR42E1Q8WUS8 393 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms