RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ZNF654Q8IZM8 581 aa19.88■□□□□ 0.77
CALD1-204ENST00000417172 PRKCSHP14314 528 aaPredicted RBP19.87■□□□□ 0.77
CALD1-204ENST00000417172 CIAPIN1Q6FI81 312 aa19.87■□□□□ 0.77
CALD1-204ENST00000417172 NUP133Q8WUM0 1156 aa19.87■□□□□ 0.77
CALD1-204ENST00000417172 MTA3Q9BTC8 594 aa19.87■□□□□ 0.77
CALD1-204ENST00000417172 SBF1O95248 1867 aa19.87■□□□□ 0.77
CALD1-204ENST00000417172 CLRN2A0PK11 232 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 GBP4Q96PP9 640 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 DDTLA6NHG4 134 aaPredicted RBP19.86■□□□□ 0.77
CALD1-204ENST00000417172 SPDYE2BA6NHP3 402 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 UBE2Q2LH0YL09 131 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 CPLX1O14810 134 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 SPDYE6P0CI01 402 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 TSPY3P0CV98 308 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 TSPY8P0CW00 308 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 GABPAQ06546 454 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 RCSD1Q6JBY9 416 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 SH3BP5LQ7L8J4 393 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 ZNF444Q8N0Y2 327 aaPredicted RBP19.86■□□□□ 0.77
CALD1-204ENST00000417172 CMTR1Q8N1G2 835 aaKnown RBP19.86■□□□□ 0.77
CALD1-204ENST00000417172 FAM184AQ8NB25 1140 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 PHKBQ93100 1093 aa19.86■□□□□ 0.77
CALD1-204ENST00000417172 MYH6P13533 1939 aa19.85■□□□□ 0.77
CALD1-204ENST00000417172 FAM196BA6NMK8 535 aa19.85■□□□□ 0.77
CALD1-204ENST00000417172 MCTP1Q6DN14 999 aa19.85■□□□□ 0.77
CALD1-204ENST00000417172 CLEC17AQ6ZS10 378 aa19.85■□□□□ 0.77
CALD1-204ENST00000417172 FERMT3Q86UX7 667 aa19.85■□□□□ 0.77
CALD1-204ENST00000417172 OGFOD1Q8N543 542 aa19.85■□□□□ 0.77
CALD1-204ENST00000417172 IDI2Q9BXS1 227 aa19.85■□□□□ 0.77
CALD1-204ENST00000417172 F13A1P00488 732 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 NTRK3Q16288 839 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 SYNE3Q6ZMZ3 975 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 TTC6Q86TZ1 520 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 TMTC2Q8N394 836 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 AGBL3Q8NEM8 1001 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 TAOK2Q9UL54 1235 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 DICER1Q9UPY3 1922 aaKnown RBP19.84■□□□□ 0.77
CALD1-204ENST00000417172 NID2Q14112 1375 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 DHX16O60231 1041 aaKnown RBP19.84■□□□□ 0.77
CALD1-204ENST00000417172 HMGN5P82970 282 aaKnown RBP19.84■□□□□ 0.77
CALD1-204ENST00000417172 GUCY1B3Q02153 619 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 DLGAP5Q15398 846 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 ARHGAP27Q6ZUM4 889 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 CHMP4CQ96CF2 233 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 SYT17Q9BSW7 474 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 GJB4Q9NTQ9 266 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 HDAC9Q9UKV0 1011 aa19.84■□□□□ 0.77
CALD1-204ENST00000417172 ZNF541Q9H0D2 1346 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 TCP10L2B9ZVM9 353 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 EGFRP00533 1210 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 RTN1Q16799 776 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 ZSCAN29Q8IWY8 852 aaPredicted RBP19.83■□□□□ 0.77
CALD1-204ENST00000417172 CCDC82Q8N4S0 544 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 AIFM3Q96NN9 605 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 DNAJC18Q9H819 358 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 ORC3Q9UBD5 711 aaPredicted RBP19.83■□□□□ 0.77
CALD1-204ENST00000417172 SERPINB13Q9UIV8 391 aa19.83■□□□□ 0.77
CALD1-204ENST00000417172 BAZ2BQ9UIF8 2168 aaKnown RBP19.82■□□□□ 0.76
CALD1-204ENST00000417172 PDCP20941 246 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 GJA3Q9Y6H8 435 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 SHMT1P34896 483 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 TROAPQ12815 778 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 FAM173BQ6P4H8 233 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 CLEC10AQ8IUN9 316 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 FANCBQ8NB91 859 aa19.82■□□□□ 0.76
CALD1-204ENST00000417172 SCAF8Q9UPN6 1271 aaKnown RBP19.82■□□□□ 0.76
CALD1-204ENST00000417172 MYH15Q9Y2K3 1946 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 FZD9O00144 591 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 HLA-DOAP06340 250 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 AKR1B1P15121 316 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 TNIP1Q15025 636 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 SHROOM1Q2M3G4 852 aaPredicted RBP19.81■□□□□ 0.76
CALD1-204ENST00000417172 NBPF9Q3BBW0 867 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 CATIPQ7Z7H3 387 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.81■□□□□ 0.76
CALD1-204ENST00000417172 ZNF287Q9HBT7 754 aa19.81■□□□□ 0.76
CALD1-204ENST00000417172 ZNF70Q9UC06 446 aaPredicted RBP19.81■□□□□ 0.76
CALD1-204ENST00000417172 RASGRP2Q7LDG7 609 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 GDPD2Q9HCC8 539 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 STX8Q9UNK0 236 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 GREB1LQ9C091 1923 aaPredicted RBP19.8■□□□□ 0.76
CALD1-204ENST00000417172 H3BQV1 296 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 PLEKHA8P1O95397 391 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 YBX3P16989 372 aaKnown RBP eCLIP19.8■□□□□ 0.76
CALD1-204ENST00000417172 GMPSP49915 693 aaPredicted RBP19.8■□□□□ 0.76
CALD1-204ENST00000417172 IFFO2Q5TF58 517 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 NEDD1Q8NHV4 660 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 CEP95Q96GE4 821 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 SLC26A6Q9BXS9 759 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 VEZTQ9HBM0 779 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 MYOZ2Q9NPC6 264 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 MTMR7Q9Y216 660 aa19.8■□□□□ 0.76
CALD1-204ENST00000417172 DDX11L8A8MPP1 907 aa19.79■□□□□ 0.76
CALD1-204ENST00000417172 GUCY1A2P33402 732 aa19.79■□□□□ 0.76
CALD1-204ENST00000417172 SPDYE2Q495Y8 402 aa19.79■□□□□ 0.76
CALD1-204ENST00000417172 RBM26Q5T8P6 1007 aaKnown RBP19.79■□□□□ 0.76
CALD1-204ENST00000417172 CDAN1Q8IWY9 1227 aa19.79■□□□□ 0.76
CALD1-204ENST00000417172 TCP11L1Q9NUJ3 509 aa19.79■□□□□ 0.76
CALD1-204ENST00000417172 MYH4Q9Y623 1939 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms