RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CAMTA2O94983 1202 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 FGFR2P21802 821 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 OAS2P29728 719 aaKnown RBP14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 RASGRF1Q13972 1273 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 SGMS1Q86VZ5 419 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 LY9Q9HBG7 655 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 RAI14Q9P0K7 980 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 SLC12A7Q9Y666 1083 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 COL22A1Q8NFW1 1626 aaPredicted RBP14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 ARID4AP29374 1257 aaPredicted RBP14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 PIP4K2BP78356 416 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 FMR1Q06787 632 aaKnown RBP eCLIP14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 GPS2Q13227 327 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 RSRC2Q7L4I2 434 aaKnown RBP14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 TRMT44Q8IYL2 757 aaKnown RBP14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 STK11IPQ8N1F8 1099 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 TXLNBQ8N3L3 684 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 SPATA5Q8NB90 893 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 IGDCC4Q8TDY8 1250 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 CCDC12Q8WUD4 166 aaPredicted RBP14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 KIFC2Q96AC6 838 aa14.62□□□□□ -0.07
LRRTM1-205ENST00000417012 MROH5Q6ZUA9 1318 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 POLR2DO15514 142 aaKnown RBP14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 SASH3O75995 380 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 BCAMP50895 628 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 SMC1AQ14683 1233 aaKnown RBP14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 UBE3CQ15386 1083 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 JAKMIP3Q5VZ66 844 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 MAGEB6Q8N7X4 407 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 TRIML1Q8N9V2 468 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 AHDC1Q5TGY3 1603 aaPredicted RBP14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 TCRBV5S4A2TA0A5A2 114 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 WTIPA6NIX2 430 aaPredicted RBP14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 CCDC175P0C221 793 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 KARSQ15046 597 aaKnown RBP14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 DHX58Q96C10 678 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 CCDC34Q96HJ3 373 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 DESI2Q9BSY9 194 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 UBXN6Q9BZV1 441 aa14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 IQSEC3Q9UPP2 1182 aaPredicted RBP14.61□□□□□ -0.07
LRRTM1-205ENST00000417012 BTBD18B2RXH4 712 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 IFIT3O14879 490 aaKnown RBP14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 FMNL1O95466 1100 aaPredicted RBP14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 PRR29P0C7W0 189 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 PTPREP23469 700 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 HNRNPH2P55795 449 aaKnown RBP14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 ZNF827Q17R98 1081 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 NT5DC1Q5TFE4 455 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 DIS3L2Q8IYB7 885 aaKnown RBP14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 AIDAQ96BJ3 306 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 PARD6BQ9BYG5 372 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 FAM217BQ9NTX9 383 aaPredicted RBP14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 SERTAD1Q9UHV2 236 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 MMP1P03956 469 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 LIFRP42702 1097 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 MORC3Q14149 939 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 KANK3Q6NY19 840 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 TRIM22Q8IYM9 498 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 FBXO2Q9UK22 296 aaPredicted RBP14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 UBE2Q2LH0YL09 131 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 SLC5A1P13866 664 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 NEK11Q8NG66 645 aa14.6□□□□□ -0.07
LRRTM1-205ENST00000417012 COL4A1P02462 1669 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 TAF1P21675 1872 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 AKR1B15C9JRZ8 316 aaPredicted RBP14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 UQCRFS1P1P0C7P4 283 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 IFNAR1P17181 557 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 TXLNAP40222 546 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 SARSP49591 514 aaKnown RBP14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 STRBPQ96SI9 672 aaKnown RBP14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 ARMT1Q9H993 441 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 TOB1P50616 345 aaPredicted RBP14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 PLCD1P51178 756 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 GRIN1Q05586 938 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 CDCA7Q9BWT1 371 aaPredicted RBP14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 CEP131Q9UPN4 1083 aa14.59□□□□□ -0.07
LRRTM1-205ENST00000417012 SPATA31A5Q5VU36 1347 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 SPATA31A7Q8IWB4 1347 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 CCDC151A5D8V7 595 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 ZBTB22O15209 634 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 PRKAB2O43741 272 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 MBD4O95243 580 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 NTSR2O95665 410 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 PANX2Q96RD6 677 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 NAPBQ9H115 298 aa14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 FOXP1Q9H334 677 aaPredicted RBP14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 SAMSN1Q9NSI8 373 aaKnown RBP14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 THRAP3Q9Y2W1 955 aaKnown RBP14.58□□□□□ -0.07
LRRTM1-205ENST00000417012 PHLPP1O60346 1717 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 ERCC5P28715 1186 aaPredicted RBP14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 CCDC152Q4G0S7 254 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 BICDL1Q6ZP65 573 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 PTF1AQ7RTS3 328 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 PPFIBP1Q86W92 1011 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 GRAMD1CQ8IYS0 662 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms