RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 JAG1P78504 1218 aa17.6■□□□□ 0.41
PAF1-202ENST00000416728 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
PAF1-202ENST00000416728 DEFB118Q96PH6 123 aa17.6■□□□□ 0.41
PAF1-202ENST00000416728 ZBTB21Q9ULJ3 1066 aa17.6■□□□□ 0.41
PAF1-202ENST00000416728 EXOC6BQ9Y2D4 811 aa17.6■□□□□ 0.41
PAF1-202ENST00000416728 USP17L10C9JJH3 530 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 TFRCP02786 760 aaKnown RBP17.59■□□□□ 0.41
PAF1-202ENST00000416728 CAPN2P17655 700 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 HOXA7P31268 230 aaPredicted RBP17.59■□□□□ 0.41
PAF1-202ENST00000416728 USP5P45974 858 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
PAF1-202ENST00000416728 MAP3K12Q12852 859 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 SHROOM1Q2M3G4 852 aaPredicted RBP17.59■□□□□ 0.41
PAF1-202ENST00000416728 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
PAF1-202ENST00000416728 AACSQ86V21 672 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 MAGEB6Q8N7X4 407 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 PAK6Q9NQU5 681 aaPredicted RBP17.59■□□□□ 0.41
PAF1-202ENST00000416728 MORF4L1Q9UBU8 362 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
PAF1-202ENST00000416728 HSP90AB4PQ58FF6 505 aa17.58■□□□□ 0.4
PAF1-202ENST00000416728 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.4
PAF1-202ENST00000416728 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.4
PAF1-202ENST00000416728 NR2E3Q9Y5X4 410 aa17.58■□□□□ 0.4
PAF1-202ENST00000416728 SIPA1L1O43166 1804 aa17.58■□□□□ 0.4
PAF1-202ENST00000416728 HMGCRP04035 888 aa17.57■□□□□ 0.4
PAF1-202ENST00000416728 HERVK_113P62684 666 aa17.57■□□□□ 0.4
PAF1-202ENST00000416728 CHRDL2Q6WN34 429 aa17.57■□□□□ 0.4
PAF1-202ENST00000416728 P2RX7Q99572 595 aaKnown RBP17.57■□□□□ 0.4
PAF1-202ENST00000416728 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.57■□□□□ 0.4
PAF1-202ENST00000416728 GJD2Q9UKL4 321 aa17.57■□□□□ 0.4
PAF1-202ENST00000416728 ATAD5Q96QE3 1844 aa17.57■□□□□ 0.4
PAF1-202ENST00000416728 GH2P01242 217 aa17.56■□□□□ 0.4
PAF1-202ENST00000416728 GPRC5AQ8NFJ5 357 aa17.56■□□□□ 0.4
PAF1-202ENST00000416728 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
PAF1-202ENST00000416728 SERPINB13Q9UIV8 391 aa17.56■□□□□ 0.4
PAF1-202ENST00000416728 MS4A1P11836 297 aa17.55■□□□□ 0.4
PAF1-202ENST00000416728 TTC6Q86TZ1 520 aa17.55■□□□□ 0.4
PAF1-202ENST00000416728 RHPN1Q8TCX5 695 aa17.55■□□□□ 0.4
PAF1-202ENST00000416728 CRISPLD2Q9H0B8 497 aa17.55■□□□□ 0.4
PAF1-202ENST00000416728 EHD4Q9H223 541 aa17.55■□□□□ 0.4
PAF1-202ENST00000416728 TXNRD2Q9NNW7 524 aa17.55■□□□□ 0.4
PAF1-202ENST00000416728 TTF1Q15361 905 aaPredicted RBP17.54■□□□□ 0.4
PAF1-202ENST00000416728 TATDN1Q6P1N9 297 aa17.54■□□□□ 0.4
PAF1-202ENST00000416728 USP17L2Q6R6M4 530 aa17.54■□□□□ 0.4
PAF1-202ENST00000416728 GTF3C2Q8WUA4 911 aaPredicted RBP17.54■□□□□ 0.4
PAF1-202ENST00000416728 SOCS4Q8WXH5 440 aa17.54■□□□□ 0.4
PAF1-202ENST00000416728 FEZ1Q99689 392 aa17.54■□□□□ 0.4
PAF1-202ENST00000416728 EMILIN3Q9NT22 766 aa17.54■□□□□ 0.4
PAF1-202ENST00000416728 EVI5O60447 810 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 PEX10O60683 326 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 MAPK4P31152 587 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 CLASRPQ8N2M8 674 aaKnown RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 NUDT12Q9BQG2 462 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 PAGR1Q9BTK6 254 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 HMX1Q9NP08 348 aaPredicted RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 RBPJLQ9UBG7 517 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 RPTORQ8N122 1335 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 CEP290O15078 2479 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 HMMRO75330 724 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 CYP2B6P20813 491 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 ERVK-9P63128 1117 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 ERVK-24P63145 666 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 TRIM32Q13049 653 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 RAB3GAP1Q15042 981 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 ZYXQ15942 572 aaKnown RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 CERKLQ49MI3 558 aaPredicted RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 TRIB2Q92519 343 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 KIF1BPQ96EK5 621 aa17.53■□□□□ 0.4
PAF1-202ENST00000416728 PAWRQ96IZ0 340 aaKnown RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
PAF1-202ENST00000416728 CDK5RAP2Q96SN8 1893 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 MYO5AQ9Y4I1 1855 aaKnown RBP17.52■□□□□ 0.39
PAF1-202ENST00000416728 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 APBB1O00213 710 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 USP14P54578 494 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 ABCB5Q2M3G0 1257 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 NECAB2Q7Z6G3 386 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 RPAP2Q8IXW5 612 aaPredicted RBP17.52■□□□□ 0.39
PAF1-202ENST00000416728 ANKLE1Q8NAG6 615 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 C12orf42Q96LP6 360 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 CABP5Q9NP86 173 aa17.52■□□□□ 0.39
PAF1-202ENST00000416728 POLR3DP05423 398 aaPredicted RBP17.51■□□□□ 0.39
PAF1-202ENST00000416728 IFIT2P09913 472 aaKnown RBP17.51■□□□□ 0.39
PAF1-202ENST00000416728 XRCC5P13010 732 aaKnown RBP17.51■□□□□ 0.39
PAF1-202ENST00000416728 PDE6AP16499 860 aa17.51■□□□□ 0.39
PAF1-202ENST00000416728 PLCD1P51178 756 aa17.51■□□□□ 0.39
PAF1-202ENST00000416728 DIS3LQ8TF46 1054 aaKnown RBP17.51■□□□□ 0.39
PAF1-202ENST00000416728 DNAJC2Q99543 621 aaKnown RBP17.51■□□□□ 0.39
PAF1-202ENST00000416728 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
PAF1-202ENST00000416728 KIAA1683Q9H0B3 1180 aa17.51■□□□□ 0.39
PAF1-202ENST00000416728 PORCNQ9H237 461 aa17.51■□□□□ 0.39
PAF1-202ENST00000416728 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
PAF1-202ENST00000416728 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms