RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SLC9C2Q5TAH2 1124 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 C20orf194Q5TEA3 1177 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 ANKRD13CQ8N6S4 541 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 DNAJC2Q99543 621 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 RIOK1Q9BRS2 568 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 EHD4Q9H223 541 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 ZBTB21Q9ULJ3 1066 aa21.34■■□□□ 1.01
PDLIM2-208ENST00000416159 LOC285556D6RIA3 1793 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 USP17L10C9JJH3 530 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 GOLIM4O00461 696 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 PDE6AP16499 860 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 UBXN2AP68543 259 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 MTMR2Q13614 643 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 BCL11AQ9H165 835 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 ASCC2Q9H1I8 757 aaPredicted RBP21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 SERPINB13Q9UIV8 391 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 GABRQQ9UN88 632 aa21.33■■□□□ 1.01
PDLIM2-208ENST00000416159 TNPO2O14787 897 aaKnown RBP21.32■■□□□ 1
PDLIM2-208ENST00000416159 HOXA7P31268 230 aaPredicted RBP21.32■■□□□ 1
PDLIM2-208ENST00000416159 TATDN1Q6P1N9 297 aa21.32■■□□□ 1
PDLIM2-208ENST00000416159 SLAIN1Q8ND83 568 aa21.32■■□□□ 1
PDLIM2-208ENST00000416159 COA7Q96BR5 231 aa21.32■■□□□ 1
PDLIM2-208ENST00000416159 CRNKL1Q9BZJ0 848 aaKnown RBP21.32■■□□□ 1
PDLIM2-208ENST00000416159 BIN2Q9UBW5 565 aaPredicted RBP21.32■■□□□ 1
PDLIM2-208ENST00000416159 ZNF532Q9HCE3 1301 aa21.31■■□□□ 1
PDLIM2-208ENST00000416159 ATP5JP18859 108 aa21.31■■□□□ 1
PDLIM2-208ENST00000416159 FLT3LGP49771 235 aa21.31■■□□□ 1
PDLIM2-208ENST00000416159 MTFR1Q15390 333 aa21.31■■□□□ 1
PDLIM2-208ENST00000416159 BOLA2Q9H3K6 86 aa21.31■■□□□ 1
PDLIM2-208ENST00000416159 PAG1Q9NWQ8 432 aa21.31■■□□□ 1
PDLIM2-208ENST00000416159 DOCK3Q8IZD9 2030 aa21.31■■□□□ 1
PDLIM2-208ENST00000416159 POLR3DP05423 398 aaPredicted RBP21.3■■□□□ 1
PDLIM2-208ENST00000416159 IRX3P78415 501 aaPredicted RBP21.3■■□□□ 1
PDLIM2-208ENST00000416159 IRF5Q13568 498 aa21.3■■□□□ 1
PDLIM2-208ENST00000416159 SHROOM1Q2M3G4 852 aaPredicted RBP21.3■■□□□ 1
PDLIM2-208ENST00000416159 NKX2-3Q8TAU0 364 aa21.3■■□□□ 1
PDLIM2-208ENST00000416159 PXYLP1Q8TE99 480 aa21.3■■□□□ 1
PDLIM2-208ENST00000416159 LRRCC1Q9C099 1032 aa21.3■■□□□ 1
PDLIM2-208ENST00000416159 TCRBV5S4A2TA0A5A2 114 aa21.29■■□□□ 1
PDLIM2-208ENST00000416159 ADCY3O60266 1144 aa21.29■■□□□ 1
PDLIM2-208ENST00000416159 GH2P01242 217 aa21.29■■□□□ 1
PDLIM2-208ENST00000416159 CERKLQ49MI3 558 aaPredicted RBP21.29■■□□□ 1
PDLIM2-208ENST00000416159 USP17L2Q6R6M4 530 aa21.29■■□□□ 1
PDLIM2-208ENST00000416159 PLCD1P51178 756 aa21.28■■□□□ 1
PDLIM2-208ENST00000416159 EDC3Q96F86 508 aaKnown RBP21.28■■□□□ 1
PDLIM2-208ENST00000416159 P2RX7Q99572 595 aaKnown RBP21.28■■□□□ 1
PDLIM2-208ENST00000416159 HAUS7Q99871 368 aa21.28■■□□□ 1
PDLIM2-208ENST00000416159 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.28■■□□□ 1
PDLIM2-208ENST00000416159 CABP5Q9NP86 173 aa21.28■■□□□ 1
PDLIM2-208ENST00000416159 MORF4L1Q9UBU8 362 aa21.28■■□□□ 1
PDLIM2-208ENST00000416159 GJB1P08034 283 aa21.27■■□□□ 1
PDLIM2-208ENST00000416159 CCL5P13501 91 aa21.27■■□□□ 1
PDLIM2-208ENST00000416159 ABCB5Q2M3G0 1257 aa21.27■■□□□ 1
PDLIM2-208ENST00000416159 RNF208Q9H0X6 261 aa21.27■■□□□ 1
PDLIM2-208ENST00000416159 MCM9Q9NXL9 1143 aa21.27■■□□□ 1
PDLIM2-208ENST00000416159 ADD2P35612 726 aa21.26■□□□□ 0.99
PDLIM2-208ENST00000416159 LCORLQ8N3X6 602 aa21.26■□□□□ 0.99
PDLIM2-208ENST00000416159 EMILIN3Q9NT22 766 aa21.26■□□□□ 0.99
PDLIM2-208ENST00000416159 CENPFP49454 3210 aa21.26■□□□□ 0.99
PDLIM2-208ENST00000416159 SHMT1P34896 483 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 GJA8P48165 433 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 USP14P54578 494 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 HERVK_113P62684 666 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 GABPAQ06546 454 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 RAB3GAP1Q15042 981 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 GTF3C2Q8WUA4 911 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 C12orf42Q96LP6 360 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 DCTPP1Q9H773 170 aa21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 DCP1AQ9NPI6 582 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-208ENST00000416159 SMARCA5O60264 1052 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 SLC34A2O95436 690 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 ELNP15502 786 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 SDR42E1Q8WUS8 393 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 GCC1Q96CN9 775 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 FEZ1Q99689 392 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 ARMT1Q9H993 441 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 TAOK2Q9UL54 1235 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 NAV1Q8NEY1 1877 aa21.24■□□□□ 0.99
PDLIM2-208ENST00000416159 INHAP05111 366 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 CAPN2P17655 700 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 UBE3CQ15386 1083 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 ZSCAN25Q6NSZ9 544 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 SHISA4Q96DD7 197 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 KIAA1683Q9H0B3 1180 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 UNC93B1Q9H1C4 597 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 ATP8A2Q9NTI2 1148 aa21.23■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L15C9J2P7 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L13C9JLJ4 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L11C9JVI0 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L18D6R9N7 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L22D6RA61 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L17D6RBQ6 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L19D6RCP7 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L20D6RJB6 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 MBD4O95243 580 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 USP17L24Q0WX57 530 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 ECHDC1Q9NTX5 307 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 RBPJLQ9UBG7 517 aa21.22■□□□□ 0.99
PDLIM2-208ENST00000416159 GJD2Q9UKL4 321 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms