RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 HOXB4P17483 251 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 RAC1P63000 192 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 GNL2Q13823 731 aaKnown RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 CCDC85BQ15834 202 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 CCDC144BQ3MJ40 725 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 ADAMTSL4Q6UY14 1074 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 TPTE2Q6XPS3 522 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 SV2BQ7L1I2 683 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 DMRTC2Q8IXT2 367 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 SOX17Q9H6I2 414 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 OSGEPQ9NPF4 335 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 SEC31BQ9NQW1 1179 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 TMEM39AQ9NV64 488 aa8.48□□□□□ -1.05
EPHA4-204ENST00000415749 NOP53Q9NZM5 478 aaKnown RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-204ENST00000415749 EP400Q96L91 3159 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 ADGRL3Q9HAR2 1447 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 GCC2Q8IWJ2 1684 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 RLBP1P12271 317 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 CDC25BP30305 580 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 DNAJA1P31689 397 aaKnown RBP8.47□□□□□ -1.05
EPHA4-204ENST00000415749 COL9A3Q14050 684 aaPredicted RBP8.47□□□□□ -1.05
EPHA4-204ENST00000415749 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 BEND7Q8N7W2 519 aaPredicted RBP8.47□□□□□ -1.05
EPHA4-204ENST00000415749 KLHL23Q8NBE8 558 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
EPHA4-204ENST00000415749 SAMM50Q9Y512 469 aa8.47□□□□□ -1.05
EPHA4-204ENST00000415749 TLDC2A0PJX2 215 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 FSCN2O14926 492 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 SNRPNP63162 240 aaKnown RBP8.46□□□□□ -1.06
EPHA4-204ENST00000415749 C19orf57Q0VDD7 668 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 R3HDM1Q15032 1099 aaKnown RBP8.46□□□□□ -1.06
EPHA4-204ENST00000415749 LINC00114Q6XXX2 140 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 HS2ST1Q7LGA3 356 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 PMFBP1Q8TBY8 1022 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 SLC7A3Q8WY07 619 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 NECAB3Q96P71 396 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-204ENST00000415749 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
EPHA4-204ENST00000415749 RALGAPBQ86X10 1494 aa8.45□□□□□ -1.06
EPHA4-204ENST00000415749 SOX1O00570 391 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-204ENST00000415749 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-204ENST00000415749 FAAP100Q0VG06 881 aa8.45□□□□□ -1.06
EPHA4-204ENST00000415749 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
EPHA4-204ENST00000415749 TXNDC11Q6PKC3 985 aa8.45□□□□□ -1.06
EPHA4-204ENST00000415749 ARMC5Q96C12 935 aa8.45□□□□□ -1.06
EPHA4-204ENST00000415749 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-204ENST00000415749 PLVAPQ9BX97 442 aa8.45□□□□□ -1.06
EPHA4-204ENST00000415749 ANKRD50Q9ULJ7 1429 aa8.45□□□□□ -1.06
EPHA4-204ENST00000415749 FBXO24O75426 580 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 TRIM28Q13263 835 aaKnown RBP8.44□□□□□ -1.06
EPHA4-204ENST00000415749 AP3B2Q13367 1082 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 PWP1Q13610 501 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 VPS72Q15906 364 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 PRRT3Q5FWE3 981 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 GMLQ99445 158 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 POLR3GLQ9BT43 218 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 MYOM2P54296 1465 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 UNC13BO14795 1591 aa8.44□□□□□ -1.06
EPHA4-204ENST00000415749 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
EPHA4-204ENST00000415749 A0A0A0MRY4 1105 aa8.43□□□□□ -1.06
EPHA4-204ENST00000415749 ZNF157P51786 506 aaPredicted RBP8.43□□□□□ -1.06
EPHA4-204ENST00000415749 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
EPHA4-204ENST00000415749 GSTM4Q03013 218 aa8.43□□□□□ -1.06
EPHA4-204ENST00000415749 SUZ12Q15022 739 aaKnown RBP8.43□□□□□ -1.06
EPHA4-204ENST00000415749 EMILIN2Q9BXX0 1053 aa8.43□□□□□ -1.06
EPHA4-204ENST00000415749 GGT7Q9UJ14 662 aa8.43□□□□□ -1.06
EPHA4-204ENST00000415749 INPP5FQ9Y2H2 1132 aa8.43□□□□□ -1.06
EPHA4-204ENST00000415749 XRN1Q8IZH2 1706 aaKnown RBP8.43□□□□□ -1.06
EPHA4-204ENST00000415749 ENC1O14682 589 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 CYP11A1P05108 521 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 ARID5AQ03989 594 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 FBXO11Q86XK2 927 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 FMR1NBQ8N0W7 255 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-204ENST00000415749 CARD10Q9BWT7 1032 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 PIF1Q9H611 641 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.42□□□□□ -1.06
EPHA4-204ENST00000415749 SBNO2Q9Y2G9 1366 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 LAMC1P11047 1609 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 CROCC2H7BZ55 1655 aa8.42□□□□□ -1.06
EPHA4-204ENST00000415749 GLI3P10071 1580 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 SLIT2O94813 1529 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 CELA3AP09093 270 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 LMNB1P20700 586 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 NME2P22392 152 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 RBL2Q08999 1139 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 FAM50AQ14320 339 aaKnown RBP8.41□□□□□ -1.06
EPHA4-204ENST00000415749 HP1BP3Q5SSJ5 553 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-204ENST00000415749 RELL1Q8IUW5 271 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 RSRP1Q9BUV0 290 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 ZSWIM4Q9H7M6 989 aa8.41□□□□□ -1.06
EPHA4-204ENST00000415749 BRWD3Q6RI45 1802 aa8.4□□□□□ -1.06
EPHA4-204ENST00000415749 COL22A1Q8NFW1 1626 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-204ENST00000415749 LRPPRCP42704 1394 aaKnown RBP8.4□□□□□ -1.06
EPHA4-204ENST00000415749 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms