RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 HOXA7P31268 230 aaPredicted RBP16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 SNX17Q15036 470 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 GPR142Q7Z601 462 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 PLEKHH3Q7Z736 793 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 ARRDC4Q8NCT1 418 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 PDLIM7Q9NR12 457 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 DNAH12Q6ZR08 3092 aa16.7■□□□□ 0.26
RAPGEF1-204ENST00000414781 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 GLRX3O76003 335 aaKnown RBP16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 TRIM27P14373 513 aa16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 PRDX5P30044 214 aa16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 HERVK_113P62684 666 aa16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 SLC39A5Q6ZMH5 540 aa16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 TIFAQ96CG3 184 aa16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 CWC22Q9HCG8 908 aaKnown RBP16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 SALL1Q9NSC2 1324 aa16.69■□□□□ 0.26
RAPGEF1-204ENST00000414781 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 KBTBD13C9JR72 458 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 MAP2K5Q13163 448 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 C1orf53Q5VUE5 145 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 P2RX7Q99572 595 aaKnown RBP16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 TXNRD2Q9NNW7 524 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 TMOD4Q9NZQ9 345 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 GAKO14976 1311 aa16.68■□□□□ 0.26
RAPGEF1-204ENST00000414781 SLC5A1P13866 664 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 FGFR2P21802 821 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 ERVK-24P63145 666 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 LRRC24Q50LG9 513 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 EDC3Q96F86 508 aaKnown RBP16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAPGEF1-204ENST00000414781 TRIM43BA6NCK2 446 aa16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 F6X3S4 739 aa16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 CNGA1P29973 690 aa16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 TRIM43Q96BQ3 446 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 PORCNQ9H237 461 aa16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 TACC3Q9Y6A5 838 aa16.66■□□□□ 0.26
RAPGEF1-204ENST00000414781 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 CCNA1P78396 465 aa16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 POTEEQ6S8J3 1075 aa16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 LPIN2Q92539 896 aa16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 LRFN3Q9BTN0 628 aa16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 WDR18Q9BV38 432 aa16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 RBPJLQ9UBG7 517 aa16.65■□□□□ 0.26
RAPGEF1-204ENST00000414781 FRMPD3Q5JV73 1810 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 SEMA3EO15041 775 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 HOXC6P09630 235 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 CAP2P40123 477 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 BACE1P56817 501 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 ATP2B2Q01814 1243 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 PICALMQ13492 652 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 MTMR2Q13614 643 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 AAMPQ13685 434 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 SUCLG2Q96I99 432 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 SNX27Q96L92 541 aa16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 DDX4Q9NQI0 724 aaKnown RBP16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF1-204ENST00000414781 SLC15A5A6NIM6 579 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 C19orf81C9J6K1 198 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 FPGSQ05932 587 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 AAK1Q2M2I8 961 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 TMEM31Q5JXX7 168 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 SH3RF1Q7Z6J0 888 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 KAZALD1Q96I82 304 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
RAPGEF1-204ENST00000414781 CLTBP09497 229 aa16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 EPHB4P54760 987 aa16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 MVPQ14764 893 aaKnown RBP16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 Q3C1V9 767 aa16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 DZIP1Q86YF9 867 aaKnown RBP16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 PAGR1Q9BTK6 254 aa16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 FLRT1Q9NZU1 646 aa16.62■□□□□ 0.25
RAPGEF1-204ENST00000414781 MUC6Q6W4X9 2439 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 FAM196BA6NMK8 535 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 KIAA0355O15063 1070 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 ZBTB22O15209 634 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 PEX10O60683 326 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms