RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 EVX2Q03828 476 aa17.86■□□□□ 0.45
LIMS4-201ENST00000413601 ZNF280CQ8ND82 737 aa17.86■□□□□ 0.45
LIMS4-201ENST00000413601 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
LIMS4-201ENST00000413601 CAP1Q01518 475 aa17.85■□□□□ 0.45
LIMS4-201ENST00000413601 PKN2Q16513 984 aaKnown RBP17.85■□□□□ 0.45
LIMS4-201ENST00000413601 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
LIMS4-201ENST00000413601 TATDN1Q6P1N9 297 aa17.85■□□□□ 0.45
LIMS4-201ENST00000413601 SMC5Q8IY18 1101 aa17.85■□□□□ 0.45
LIMS4-201ENST00000413601 TBC1D2Q9BYX2 928 aa17.85■□□□□ 0.45
LIMS4-201ENST00000413601 AS3MTQ9HBK9 375 aa17.85■□□□□ 0.45
LIMS4-201ENST00000413601 TRIM17Q9Y577 477 aa17.85■□□□□ 0.45
LIMS4-201ENST00000413601 CYP2D6P10635 497 aa17.84■□□□□ 0.45
LIMS4-201ENST00000413601 OTOP1Q7RTM1 612 aa17.84■□□□□ 0.45
LIMS4-201ENST00000413601 LNPKQ9C0E8 428 aa17.84■□□□□ 0.45
LIMS4-201ENST00000413601 ATP8A2Q9NTI2 1148 aa17.84■□□□□ 0.45
LIMS4-201ENST00000413601 CPA4Q9UI42 421 aa17.84■□□□□ 0.45
LIMS4-201ENST00000413601 ZBTB21Q9ULJ3 1066 aa17.84■□□□□ 0.45
LIMS4-201ENST00000413601 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
LIMS4-201ENST00000413601 ADGRA2Q96PE1 1338 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 GH2P01242 217 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 CYP2C8P10632 490 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 SHMT1P34896 483 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 HMGCS2P54868 508 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 GABPAQ06546 454 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 CERKLQ49MI3 558 aaPredicted RBP17.83■□□□□ 0.44
LIMS4-201ENST00000413601 TREML2Q5T2D2 321 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 C17orf99Q6UX52 265 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 APPBP2Q92624 585 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 OSBP2Q969R2 916 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 WDR18Q9BV38 432 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 GINM1Q9NU53 330 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 STAP2Q9UGK3 403 aa17.83■□□□□ 0.44
LIMS4-201ENST00000413601 ZFYP08048 801 aaPredicted RBP17.82■□□□□ 0.44
LIMS4-201ENST00000413601 PDE1AP54750 535 aa17.82■□□□□ 0.44
LIMS4-201ENST00000413601 MTMR2Q13614 643 aa17.82■□□□□ 0.44
LIMS4-201ENST00000413601 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
LIMS4-201ENST00000413601 PROCA1Q8NCQ7 364 aaPredicted RBP17.82■□□□□ 0.44
LIMS4-201ENST00000413601 STRBPQ96SI9 672 aaKnown RBP17.82■□□□□ 0.44
LIMS4-201ENST00000413601 PARK7Q99497 189 aaKnown RBP17.82■□□□□ 0.44
LIMS4-201ENST00000413601 FSD1Q9BTV5 496 aa17.82■□□□□ 0.44
LIMS4-201ENST00000413601 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
LIMS4-201ENST00000413601 AGTPBP1Q9UPW5 1226 aa17.82■□□□□ 0.44
LIMS4-201ENST00000413601 HPS5Q9UPZ3 1129 aa17.82■□□□□ 0.44
LIMS4-201ENST00000413601 SLC45A1Q9Y2W3 748 aa17.82■□□□□ 0.44
LIMS4-201ENST00000413601 CYP2D7A0A087X1C5 515 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 USP17L12C9JPN9 530 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 USP17L21D6R901 530 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 ECM2O94769 699 aaPredicted RBP17.81■□□□□ 0.44
LIMS4-201ENST00000413601 BACE1P56817 501 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 LACTBP83111 547 aaPredicted RBP17.81■□□□□ 0.44
LIMS4-201ENST00000413601 ABCB5Q2M3G0 1257 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 DYNLL2Q96FJ2 89 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 ARHGAP39Q9C0H5 1083 aa17.81■□□□□ 0.44
LIMS4-201ENST00000413601 USP17L10C9JJH3 530 aa17.8■□□□□ 0.44
LIMS4-201ENST00000413601 SMIM22K7EJ46 135 aa17.8■□□□□ 0.44
LIMS4-201ENST00000413601 M0R2C6 588 aa17.8■□□□□ 0.44
LIMS4-201ENST00000413601 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
LIMS4-201ENST00000413601 LRRFIP1Q32MZ4 808 aaKnown RBP17.8■□□□□ 0.44
LIMS4-201ENST00000413601 SH3D19Q5HYK7 790 aa17.8■□□□□ 0.44
LIMS4-201ENST00000413601 C12orf60Q5U649 245 aa17.8■□□□□ 0.44
LIMS4-201ENST00000413601 SLC44A5Q8NCS7 719 aa17.8■□□□□ 0.44
LIMS4-201ENST00000413601 GPAA1O43292 621 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 NUCB1Q02818 461 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 KIF22Q14807 665 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 CTR9Q6PD62 1173 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 CHD1LQ86WJ1 897 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 AMOTL1Q8IY63 956 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
LIMS4-201ENST00000413601 CABP5Q9NP86 173 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
LIMS4-201ENST00000413601 GSG1L2A8MUP6 293 aa17.78■□□□□ 0.44
LIMS4-201ENST00000413601 C19orf81C9J6K1 198 aa17.78■□□□□ 0.44
LIMS4-201ENST00000413601 BCRP11274 1271 aa17.78■□□□□ 0.44
LIMS4-201ENST00000413601 ARHGEF6Q15052 776 aa17.78■□□□□ 0.44
LIMS4-201ENST00000413601 SMCR8Q8TEV9 937 aaPredicted RBP17.78■□□□□ 0.44
LIMS4-201ENST00000413601 TMOD4Q9NZQ9 345 aa17.78■□□□□ 0.44
LIMS4-201ENST00000413601 SWAP70Q9UH65 585 aa17.78■□□□□ 0.44
LIMS4-201ENST00000413601 MPHOSPH10O00566 681 aaKnown RBP17.77■□□□□ 0.44
LIMS4-201ENST00000413601 CTGFP29279 349 aa17.77■□□□□ 0.44
LIMS4-201ENST00000413601 GUCY1A2P33402 732 aa17.77■□□□□ 0.44
LIMS4-201ENST00000413601 SEPT2Q15019 361 aa17.77■□□□□ 0.44
LIMS4-201ENST00000413601 ZMYM1Q5SVZ6 1142 aa17.77■□□□□ 0.44
LIMS4-201ENST00000413601 EVI5LQ96CN4 794 aa17.77■□□□□ 0.44
LIMS4-201ENST00000413601 PNMA3Q9UL41 463 aa17.77■□□□□ 0.44
LIMS4-201ENST00000413601 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.43
LIMS4-201ENST00000413601 OSBPP22059 807 aa17.76■□□□□ 0.43
LIMS4-201ENST00000413601 PSMC4P43686 418 aa17.76■□□□□ 0.43
LIMS4-201ENST00000413601 CDK8P49336 464 aa17.76■□□□□ 0.43
LIMS4-201ENST00000413601 PABPC4Q13310 644 aaKnown RBP eCLIP17.76■□□□□ 0.43
LIMS4-201ENST00000413601 ZYXQ15942 572 aaKnown RBP17.76■□□□□ 0.43
LIMS4-201ENST00000413601 USP17L2Q6R6M4 530 aa17.76■□□□□ 0.43
LIMS4-201ENST00000413601 PLEKHM2Q8IWE5 1019 aa17.76■□□□□ 0.43
LIMS4-201ENST00000413601 ASCC2Q9H1I8 757 aaPredicted RBP17.76■□□□□ 0.43
LIMS4-201ENST00000413601 EMILIN3Q9NT22 766 aa17.76■□□□□ 0.43
LIMS4-201ENST00000413601 ARPP21Q9UBL0 812 aaPredicted RBP17.76■□□□□ 0.43
LIMS4-201ENST00000413601 APPP05067 770 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 GNAT2P19087 354 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms