RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 GPAA1O43292 621 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 ASNSP08243 561 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 SHMT1P34896 483 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 TAF1CQ15572 869 aaPredicted RBP12.1□□□□□ -0.47
TMEM248-202ENST00000413593 SHROOM1Q2M3G4 852 aaPredicted RBP12.1□□□□□ -0.47
TMEM248-202ENST00000413593 PRRT2Q7Z6L0 340 aaPredicted RBP12.1□□□□□ -0.47
TMEM248-202ENST00000413593 ANKRD23Q86SG2 305 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
TMEM248-202ENST00000413593 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 SEC62Q99442 399 aaKnown RBP12.1□□□□□ -0.47
TMEM248-202ENST00000413593 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
TMEM248-202ENST00000413593 CDK5RAP2Q96SN8 1893 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 GSG1L2A8MUP6 293 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 USP17L12C9JPN9 530 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 USP17L21D6R901 530 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 PDE4AP27815 886 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 SPP2Q13103 211 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 GPAT2Q6NUI2 795 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 CTR9Q6PD62 1173 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
TMEM248-202ENST00000413593 TICAM2Q86XR7 235 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 WDR18Q9BV38 432 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 AS3MTQ9HBK9 375 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 ZFYVE28Q9HCC9 887 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
TMEM248-202ENST00000413593 TRIM6-TRIM34B2RNG4 842 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 SMIM22K7EJ46 135 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 PDHXO00330 501 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 FKTNO75072 461 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 GH2P01242 217 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 GNAT2P19087 354 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 CERKLQ49MI3 558 aaPredicted RBP12.08□□□□□ -0.48
TMEM248-202ENST00000413593 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 SLC44A5Q8NCS7 719 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 EPB41L4AQ9HCS5 686 aaPredicted RBP12.08□□□□□ -0.48
TMEM248-202ENST00000413593 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
TMEM248-202ENST00000413593 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
TMEM248-202ENST00000413593 TLR2O60603 784 aa12.07□□□□□ -0.48
TMEM248-202ENST00000413593 HMGCS2P54868 508 aa12.07□□□□□ -0.48
TMEM248-202ENST00000413593 ABCB5Q2M3G0 1257 aa12.07□□□□□ -0.48
TMEM248-202ENST00000413593 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
TMEM248-202ENST00000413593 GADL1Q6ZQY3 521 aa12.07□□□□□ -0.48
TMEM248-202ENST00000413593 RILPL2Q969X0 211 aa12.07□□□□□ -0.48
TMEM248-202ENST00000413593 SWAP70Q9UH65 585 aa12.07□□□□□ -0.48
TMEM248-202ENST00000413593 NAV1Q8NEY1 1877 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 A0A0D9SFI3 127 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 PATL2C9JE40 543 aaKnown RBP12.06□□□□□ -0.48
TMEM248-202ENST00000413593 APPP05067 770 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 GUCY1A2P33402 732 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 CDK8P49336 464 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 BACE1P56817 501 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 MTMR2Q13614 643 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 SH3D19Q5HYK7 790 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 CCDC129Q6ZRS4 1044 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 CTU1Q7Z7A3 348 aaKnown RBP12.06□□□□□ -0.48
TMEM248-202ENST00000413593 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
TMEM248-202ENST00000413593 FAM227BQ96M60 508 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 PARK7Q99497 189 aaKnown RBP12.06□□□□□ -0.48
TMEM248-202ENST00000413593 CABP5Q9NP86 173 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 AGTPBP1Q9UPW5 1226 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 SLC45A1Q9Y2W3 748 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 ADGRA2Q96PE1 1338 aa12.06□□□□□ -0.48
TMEM248-202ENST00000413593 MYH7P12883 1935 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 USP17L10C9JJH3 530 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 FOXP2O15409 715 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 CYP2C8P10632 490 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 SDSP20132 328 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 TDO2P48775 406 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 SP3Q02447 781 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
TMEM248-202ENST00000413593 DGKZQ13574 1117 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 TREML2Q5T2D2 321 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 NACAP1Q9BZK3 213 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 MCOLN1Q9GZU1 580 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 MYH1P12882 1939 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 ROBO3Q96MS0 1386 aa12.05□□□□□ -0.48
TMEM248-202ENST00000413593 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 C19orf81C9J6K1 198 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 MPHOSPH10O00566 681 aaKnown RBP12.04□□□□□ -0.48
TMEM248-202ENST00000413593 AKR1B1P15121 316 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 GSPT1P15170 499 aaKnown RBP12.04□□□□□ -0.48
TMEM248-202ENST00000413593 SEPT2Q15019 361 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 MCMDC2Q4G0Z9 681 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 TTC22Q5TAA0 569 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 VPS53Q5VIR6 699 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 TMEM179Q6ZVK1 233 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms