RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 ERICH2A1L162 156 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 CCDC69A6NI79 296 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 GOLGA8AA7E2F4 631 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 DDAH1O94760 285 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 CDC27P30260 824 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 SHMT1P34896 483 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 RASSF7Q02833 373 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 TROAPQ12815 778 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 TNIP1Q15025 636 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 FAM47AQ5JRC9 791 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 CIAPIN1Q6FI81 312 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 DGKHQ86XP1 1220 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 SLC44A5Q8NCS7 719 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 NEDD1Q8NHV4 660 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 JDP2Q8WYK2 163 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 PRMT6Q96LA8 375 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-207ENST00000413509 MAP3K14Q99558 947 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 ZKSCAN3Q9BRR0 538 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 ANP32EQ9BTT0 268 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 FHDC1Q9C0D6 1143 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-207ENST00000413509 DHX36Q9H2U1 1008 aaKnown RBP9.65□□□□□ -0.86
HDAC9-207ENST00000413509 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
HDAC9-207ENST00000413509 MYH15Q9Y2K3 1946 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 DDX11L8A8MPP1 907 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 NMT2O60551 498 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 CDKL5O76039 1030 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 F13A1P00488 732 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 CALM1P0DP23 149 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 CALM2P0DP24 149 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 CALM3P0DP25 149 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 IFNAR1P17181 557 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 TFAP4Q01664 338 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 FUT2Q10981 343 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 RTN1Q16799 776 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 IFIT1BQ5T764 474 aaKnown RBP9.64□□□□□ -0.87
HDAC9-207ENST00000413509 LARP1BQ659C4 914 aaKnown RBP9.64□□□□□ -0.87
HDAC9-207ENST00000413509 NFXL1Q6ZNB6 911 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 CDC37L1Q7L3B6 337 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 NBPF11Q86T75 865 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 ZFPM1Q8IX07 1006 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 STK11IPQ8N1F8 1099 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 FANCBQ8NB91 859 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 DPF2Q92785 391 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDAC9-207ENST00000413509 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 SERPINB13Q9UIV8 391 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 HDAC9Q9UKV0 1011 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 KIF3AQ9Y496 699 aa9.64□□□□□ -0.87
HDAC9-207ENST00000413509 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 TCHHQ07283 1943 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 TSPY2A6NKD2 308 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 DTNBO60941 627 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-207ENST00000413509 PTMSP20962 102 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 ADD1P35611 737 aaKnown RBP9.63□□□□□ -0.87
HDAC9-207ENST00000413509 PICALMQ13492 652 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 DLGAP5Q15398 846 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 SYNE3Q6ZMZ3 975 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 CATIPQ7Z7H3 387 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 FAM83AQ86UY5 434 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 TMEM87AQ8NBN3 555 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 MYL10Q9BUA6 226 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 TDRD3Q9H7E2 651 aaKnown RBP9.63□□□□□ -0.87
HDAC9-207ENST00000413509 DNAJC18Q9H819 358 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 ZNF70Q9UC06 446 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-207ENST00000413509 PGAP2Q9UHJ9 254 aa9.63□□□□□ -0.87
HDAC9-207ENST00000413509 ZBTB12Q9Y330 459 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-207ENST00000413509 MYH6P13533 1939 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 DDTLA6NHG4 134 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 CPLX1O14810 134 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 HLA-DOAP06340 250 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 TSPY3P0CV98 308 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 TSPY8P0CW00 308 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 RXRAP19793 462 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 LMNB1P20700 586 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 RBM5P52756 815 aaKnown RBP eCLIP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 CACNB3P54284 484 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 RESTQ13127 1097 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 SLC4A8Q2Y0W8 1093 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 TATDN1Q6P1N9 297 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 CPLX2Q6PUV4 134 aaKnown RBP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 TMTC3Q6ZXV5 915 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 RAB11FIP4Q86YS3 637 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 ZNF444Q8N0Y2 327 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 SYT17Q9BSW7 474 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 ORC3Q9UBD5 711 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 PI4KBQ9UBF8 816 aa9.62□□□□□ -0.87
HDAC9-207ENST00000413509 NAP1L2Q9ULW6 460 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-207ENST00000413509 ZNF541Q9H0D2 1346 aa9.61□□□□□ -0.87
HDAC9-207ENST00000413509 UTRNP46939 3433 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms