RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 NBPF12Q5TAG4 269 aaPredicted RBP13.72□□□□□ -0.21
HDAC9-206ENST00000413380 SLC44A5Q8NCS7 719 aa13.72□□□□□ -0.21
HDAC9-206ENST00000413380 CCDC17Q96LX7 622 aa13.72□□□□□ -0.21
HDAC9-206ENST00000413380 JAKMIP1Q96N16 626 aaKnown RBP13.72□□□□□ -0.21
HDAC9-206ENST00000413380 AGXT2Q9BYV1 514 aa13.72□□□□□ -0.21
HDAC9-206ENST00000413380 ALDH8A1Q9H2A2 487 aaPredicted RBP13.72□□□□□ -0.21
HDAC9-206ENST00000413380 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
HDAC9-206ENST00000413380 RPS6KB1P23443 525 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 NOVP48745 357 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 ANTXR2P58335 489 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 EXOSC10Q01780 885 aaKnown RBP13.71□□□□□ -0.21
HDAC9-206ENST00000413380 SLC4A8Q2Y0W8 1093 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 SUPT20HL1Q3ZLR7 823 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 BLOC1S2Q6QNY1 142 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 RUFY3Q7L099 469 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 DHX32Q7L7V1 743 aaKnown RBP13.71□□□□□ -0.21
HDAC9-206ENST00000413380 RALYLQ86SE5 291 aaKnown RBP13.71□□□□□ -0.21
HDAC9-206ENST00000413380 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 ESR2Q92731 530 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 TTC14Q96N46 770 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 GINM1Q9NU53 330 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 TCP11L1Q9NUJ3 509 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 ZNF112Q9UJU3 913 aa13.71□□□□□ -0.21
HDAC9-206ENST00000413380 IGKV6D-41A0A0C4DH26 115 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 PHF20L1A8MW92 1017 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 B4E1Z4 1266 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 MCM5P33992 734 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-206ENST00000413380 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-206ENST00000413380 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC9-206ENST00000413380 MKNK2Q9HBH9 465 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-206ENST00000413380 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 ZSWIM5Q9P217 1185 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 SCAF8Q9UPN6 1271 aaKnown RBP13.7□□□□□ -0.22
HDAC9-206ENST00000413380 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-206ENST00000413380 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
HDAC9-206ENST00000413380 KIF3CO14782 793 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 KDM4AO75164 1064 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 PRDM1O75626 825 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 MAP3K11Q16584 847 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 CYB5R4Q7L1T6 521 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
HDAC9-206ENST00000413380 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC9-206ENST00000413380 GLIS2Q9BZE0 524 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-206ENST00000413380 PTPRFP10586 1907 aa13.68□□□□□ -0.22
HDAC9-206ENST00000413380 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
HDAC9-206ENST00000413380 SLURP2P0DP57 97 aa13.68□□□□□ -0.22
HDAC9-206ENST00000413380 RRP1BQ14684 758 aaKnown RBP13.68□□□□□ -0.22
HDAC9-206ENST00000413380 CERKLQ49MI3 558 aaPredicted RBP13.68□□□□□ -0.22
HDAC9-206ENST00000413380 CCDC178Q5BJE1 867 aa13.68□□□□□ -0.22
HDAC9-206ENST00000413380 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
HDAC9-206ENST00000413380 ZNF526Q8TF50 670 aaPredicted RBP13.68□□□□□ -0.22
HDAC9-206ENST00000413380 ANKS1AQ92625 1134 aa13.68□□□□□ -0.22
HDAC9-206ENST00000413380 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
HDAC9-206ENST00000413380 ZNF341Q9BYN7 854 aa13.68□□□□□ -0.22
HDAC9-206ENST00000413380 UPF3BQ9BZI7 483 aaKnown RBP13.68□□□□□ -0.22
HDAC9-206ENST00000413380 UNCXA6NJT0 531 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 PRC1O43663 620 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 RANBP6O60518 1105 aaKnown RBP13.67□□□□□ -0.22
HDAC9-206ENST00000413380 CTNND1O60716 968 aaKnown RBP13.67□□□□□ -0.22
HDAC9-206ENST00000413380 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
HDAC9-206ENST00000413380 CAP2P40123 477 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 LIFRP42702 1097 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 EVCP57679 992 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 SEC23AQ15436 765 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 RRP12Q5JTH9 1297 aaKnown RBP13.67□□□□□ -0.22
HDAC9-206ENST00000413380 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
HDAC9-206ENST00000413380 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
HDAC9-206ENST00000413380 SGMS1Q86VZ5 419 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 IQCA1Q86XH1 822 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC9-206ENST00000413380 IGDCC4Q8TDY8 1250 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
HDAC9-206ENST00000413380 SH2B2O14492 632 aaPredicted RBP13.66□□□□□ -0.22
HDAC9-206ENST00000413380 USP2O75604 605 aaPredicted RBP13.66□□□□□ -0.22
HDAC9-206ENST00000413380 TSPY3P0CV98 308 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 TSPY8P0CW00 308 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 CPA1P15085 419 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 AKR1B1P15121 316 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 NF2P35240 595 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 NEK4P51957 841 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 FKBP1BP68106 108 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 TFAP4Q01664 338 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
HDAC9-206ENST00000413380 FAM47AQ5JRC9 791 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 PRAMEF18Q5VWM3 479 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 TMEM179Q6ZVK1 233 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
HDAC9-206ENST00000413380 DGKHQ86XP1 1220 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms