RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 GPR75-ASB3A0A0A6YYF3 556 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 RTN1Q16799 776 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 CAVIN1Q6NZI2 390 aaKnown RBP11.34□□□□□ -0.59
SMPD4-203ENST00000412570 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-203ENST00000412570 KCTD1Q719H9 257 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 ZSCAN31Q96LW9 406 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-203ENST00000412570 GBP4Q96PP9 640 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 ATP8A2Q9NTI2 1148 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
SMPD4-203ENST00000412570 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
SMPD4-203ENST00000412570 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 NBPF11Q86T75 865 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 C8orf76Q96K31 380 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 ALG1Q9BT22 464 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 SH2B1Q9NRF2 756 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-203ENST00000412570 HPS5Q9UPZ3 1129 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
SMPD4-203ENST00000412570 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.59
SMPD4-203ENST00000412570 DEKP35659 375 aaKnown RBP11.33□□□□□ -0.6
SMPD4-203ENST00000412570 TGFB2P61812 414 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
SMPD4-203ENST00000412570 PANK2Q9BZ23 570 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 ARPP21Q9UBL0 812 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-203ENST00000412570 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 TRAK2O60296 914 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 HLA-DOAP06340 250 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 NUCB2P80303 420 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
SMPD4-203ENST00000412570 GRM1Q13255 1194 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 RASGRP4Q8TDF6 673 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-203ENST00000412570 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 GOLGA6L22H0YM25 854 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 FMR1Q06787 632 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMPD4-203ENST00000412570 SEPT2Q15019 361 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-203ENST00000412570 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 IL17RBQ9NRM6 502 aa11.33□□□□□ -0.6
SMPD4-203ENST00000412570 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 STAG1Q8WVM7 1258 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 GOLGA6L4A6NEF3 574 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 GH2P01242 217 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 ZSCAN22P10073 491 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-203ENST00000412570 CUL4AQ13619 759 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 TTLL12Q14166 644 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-203ENST00000412570 CAMK4Q16566 473 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 SPECC1Q5M775 1068 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-203ENST00000412570 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 RASA1P20936 1047 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 C9orf131Q5VYM1 1079 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 PGBD1Q96JS3 809 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 OSBPL5Q9H0X9 879 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-203ENST00000412570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.32□□□□□ -0.64e-6■■□□□ 13.5
SMPD4-203ENST00000412570 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
SMPD4-203ENST00000412570 WNT10BO00744 389 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 PFKFB2O60825 505 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 FDPSP14324 419 aaKnown RBP11.31□□□□□ -0.6
SMPD4-203ENST00000412570 MARCKSP29966 332 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-203ENST00000412570 ANGEL2Q5VTE6 544 aaKnown RBP11.31□□□□□ -0.6
SMPD4-203ENST00000412570 TTBK2Q6IQ55 1244 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 CPLX2Q6PUV4 134 aaKnown RBP11.31□□□□□ -0.6
SMPD4-203ENST00000412570 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 HEATR3Q7Z4Q2 680 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 TRPM4Q8TD43 1214 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 FAM205AQ6ZU69 1335 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 A0A087WWV3 80 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 FAM205CA6NFA0 338 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 USP17L5A8MUK1 530 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 MYO1BO43795 1136 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 NR5A1Q13285 461 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
SMPD4-203ENST00000412570 KCNB2Q92953 911 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 C10orf71Q711Q0 1435 aa11.31□□□□□ -0.6
SMPD4-203ENST00000412570 F13A1P00488 732 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 PLCG2P16885 1265 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 SSRP1Q08945 709 aaKnown RBP11.3□□□□□ -0.6
SMPD4-203ENST00000412570 TRIM29Q14134 588 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 RASA3Q14644 834 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 TTC6Q86TZ1 520 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-203ENST00000412570 WDR33Q9C0J8 1336 aaKnown RBP11.3□□□□□ -0.6
SMPD4-203ENST00000412570 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 LRP5O75197 1615 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 CASZ1Q86V15 1759 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 JAG1P78504 1218 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-203ENST00000412570 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
SMPD4-203ENST00000412570 MRVI1Q9Y6F6 885 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms