RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 DCTN1Q14203 1278 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 GIMAP6Q6P9H5 292 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 CEP57Q86XR8 500 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 PALB2Q86YC2 1186 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 SRPK1Q96SB4 655 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 TSC22D3Q99576 134 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 SLC5A4Q9NY91 659 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 HESX1Q9UBX0 185 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 TMED5Q9Y3A6 229 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 N4BP2Q86UW6 1770 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 NRXN1Q9ULB1 1477 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 SBNO2Q9Y2G9 1366 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 PALM3A6NDB9 673 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 SHOX2O60902 331 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 GADD45BO75293 160 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 TRIM27P14373 513 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 ATICP31939 592 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 CCZ1BP86790 482 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 CCZ1P86791 482 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 CCDC57Q2TAC2 916 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 BEND6Q5SZJ8 279 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 ZNF362Q5T0B9 420 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 LMNTD2Q8IXW0 634 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 CACTINQ8WUQ7 758 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 NEUROD6Q96NK8 337 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 TNMDQ9H2S6 317 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 DHX36Q9H2U1 1008 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 ACBD3Q9H3P7 528 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 PDE11AQ9HCR9 933 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 AASDHPPTQ9NRN7 309 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 CCDC159P0C7I6 412 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 IDO1P14902 403 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 GSPT1P15170 499 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 ZFXP17010 805 aaPredicted RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 BPIFB4P59827 614 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 ACCSLQ4AC99 568 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 ZCCHC8Q6NZY4 707 aaKnown RBP5.88□□□□□ -1.47
HERC4-205ENST00000412272 CENPTQ96BT3 561 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 MAML3Q96JK9 1138 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 NACAP1Q9BZK3 213 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 SYNCQ9H7C4 482 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 INIPQ9NRY2 104 aa5.88□□□□□ -1.47
HERC4-205ENST00000412272 TMEM247A6NEH6 219 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 GOLGA8AA7E2F4 631 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 BIN1O00499 593 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 MGRN1O60291 552 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 EVI5O60447 810 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 USP5P45974 858 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 ARPC4P59998 168 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 LRP8Q14114 963 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 GPR162Q16538 588 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 TTC22Q5TAA0 569 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 ANKRD13DQ6ZTN6 518 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 TMCO5AQ8N6Q1 288 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 GPR161Q8N6U8 529 aaKnown RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 CEP295NLQ96MC4 621 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 C6orf203Q9P0P8 240 aaPredicted RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 KIAA1468Q9P260 1216 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 TMCC3Q9ULS5 477 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 PREX1Q8TCU6 1659 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 AKR1B10O60218 316 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 CCT5P48643 541 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 TUBB4BP68371 445 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 MKRN4PQ13434 485 aaPredicted RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 SNCBQ16143 134 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 LONRF1Q17RB8 773 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 EXOC3L1Q86VI1 746 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 LILRB2Q8N423 598 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 OSBPL5Q9H0X9 879 aaPredicted RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 MRPL46Q9H2W6 279 aaKnown RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 ARFGAP3Q9NP61 516 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 TUBA8Q9NY65 449 aaPredicted RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 WDR35Q9P2L0 1181 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 IMPACTQ9P2X3 320 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 QRICH2Q9H0J4 1663 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 LINC00854A0A1B0GVQ3 168 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 EBAG9O00559 213 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 MAP3K13O43283 966 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 BCRP11274 1271 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 EIF2S2P20042 333 aaKnown RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 ATP4AP20648 1035 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 WASHC5Q12768 1159 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 ENOX2Q16206 610 aaKnown RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 NUTM2DQ5VT03 806 aaPredicted RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 ESX1Q8N693 406 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 UBXN4Q92575 508 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 SMARCC1Q92922 1105 aaPredicted RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 GSDMAQ96QA5 445 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 SPAG5Q96R06 1193 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 TCHPQ9BT92 498 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.87□□□□□ -1.47
HERC4-205ENST00000412272 EBF2Q9HAK2 575 aa5.87□□□□□ -1.47
HERC4-205ENST00000412272 DDX25Q9UHL0 483 aaKnown RBP5.87□□□□□ -1.47
HERC4-205ENST00000412272 GPR75-ASB3A0A0A6YYF3 556 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 MCM3P25205 808 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 BLMHQ13867 455 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 PLCB4Q15147 1175 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 LONRF2Q1L5Z9 754 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 RSRC2Q7L4I2 434 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms