RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 GDF11O95390 407 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 ASNSP08243 561 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 OSBPP22059 807 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 HMGCS2P54868 508 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 HAUS7Q99871 368 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 BOLA2Q9H3K6 86 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 PAG1Q9NWQ8 432 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 SRRDQ9UH36 339 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 ZBTB21Q9ULJ3 1066 aa12.3□□□□□ -0.44
LINC01643-201ENST00000412218 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
LINC01643-201ENST00000412218 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
LINC01643-201ENST00000412218 FMNL1O95466 1100 aaPredicted RBP12.29□□□□□ -0.44
LINC01643-201ENST00000412218 FCGRTP55899 365 aa12.29□□□□□ -0.44
LINC01643-201ENST00000412218 MTMR2Q13614 643 aa12.29□□□□□ -0.44
LINC01643-201ENST00000412218 TATDN1Q6P1N9 297 aa12.29□□□□□ -0.44
LINC01643-201ENST00000412218 NBPF11Q86T75 865 aa12.29□□□□□ -0.44
LINC01643-201ENST00000412218 SMCR8Q8TEV9 937 aaPredicted RBP12.29□□□□□ -0.44
LINC01643-201ENST00000412218 SERPINB13Q9UIV8 391 aa12.29□□□□□ -0.44
LINC01643-201ENST00000412218 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
LINC01643-201ENST00000412218 HOXD10P28358 340 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 ADD2P35612 726 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 BACE1P56817 501 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 PABPC4Q13310 644 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01643-201ENST00000412218 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 LCORLQ8N3X6 602 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 CRNKL1Q9BZJ0 848 aaKnown RBP12.28□□□□□ -0.44
LINC01643-201ENST00000412218 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 MYPNQ86TC9 1320 aa12.28□□□□□ -0.44
LINC01643-201ENST00000412218 NAV1Q8NEY1 1877 aa12.27□□□□□ -0.44
LINC01643-201ENST00000412218 GH2P01242 217 aa12.27□□□□□ -0.45
LINC01643-201ENST00000412218 PLCD1P51178 756 aa12.27□□□□□ -0.45
LINC01643-201ENST00000412218 PRKCZQ05513 592 aa12.27□□□□□ -0.45
LINC01643-201ENST00000412218 FAM110CQ1W6H9 321 aa12.27□□□□□ -0.45
LINC01643-201ENST00000412218 SLFNL1Q499Z3 407 aa12.27□□□□□ -0.45
LINC01643-201ENST00000412218 ANKRD13CQ8N6S4 541 aa12.27□□□□□ -0.45
LINC01643-201ENST00000412218 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC01643-201ENST00000412218 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.45
LINC01643-201ENST00000412218 C19orf81C9J6K1 198 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 USP17L10C9JJH3 530 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 MBD4O95243 580 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 CHGBP05060 677 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 SHMT1P34896 483 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 GCLCP48506 637 aaPredicted RBP12.26□□□□□ -0.45
LINC01643-201ENST00000412218 GABPAQ06546 454 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 RAET1EQ8TD07 263 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 SDR42E1Q8WUS8 393 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 TMEM106CQ9BVX2 250 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
LINC01643-201ENST00000412218 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 DCP1AQ9NPI6 582 aaPredicted RBP12.26□□□□□ -0.45
LINC01643-201ENST00000412218 TMOD4Q9NZQ9 345 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 PCDHB15Q9Y5E8 787 aa12.26□□□□□ -0.45
LINC01643-201ENST00000412218 TNRC18O15417 2968 aaPredicted RBP12.25□□□□□ -0.45
LINC01643-201ENST00000412218 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
LINC01643-201ENST00000412218 POLR3DP05423 398 aaPredicted RBP12.25□□□□□ -0.45
LINC01643-201ENST00000412218 EN2P19622 333 aaPredicted RBP12.25□□□□□ -0.45
LINC01643-201ENST00000412218 HOXA7P31268 230 aaPredicted RBP12.25□□□□□ -0.45
LINC01643-201ENST00000412218 GRK4P32298 578 aa12.25□□□□□ -0.45
LINC01643-201ENST00000412218 EVX2Q03828 476 aa12.25□□□□□ -0.45
LINC01643-201ENST00000412218 UBE3CQ15386 1083 aa12.25□□□□□ -0.45
LINC01643-201ENST00000412218 ABCB5Q2M3G0 1257 aa12.25□□□□□ -0.45
LINC01643-201ENST00000412218 CERKLQ49MI3 558 aaPredicted RBP12.25□□□□□ -0.45
LINC01643-201ENST00000412218 MCM9Q9NXL9 1143 aa12.25□□□□□ -0.45
LINC01643-201ENST00000412218 GABRQQ9UN88 632 aa12.25□□□□□ -0.45
LINC01643-201ENST00000412218 MYH1P12882 1939 aa12.25□□□□□ -0.45
LINC01643-201ENST00000412218 PRKAB2O43741 272 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
LINC01643-201ENST00000412218 CYP2D6P10635 497 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
LINC01643-201ENST00000412218 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 USP17L2Q6R6M4 530 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 C12orf42Q96LP6 360 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
LINC01643-201ENST00000412218 GUCY1A2P33402 732 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 FLT3LGP49771 235 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 HERVK_113P62684 666 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 IRF5Q13568 498 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 MTFR1Q15390 333 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 ZSCAN25Q6NSZ9 544 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 FEZ1Q99689 392 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 ATP8A2Q9NTI2 1148 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
LINC01643-201ENST00000412218 USP14P54578 494 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 ZYXQ15942 572 aaKnown RBP12.22□□□□□ -0.45
LINC01643-201ENST00000412218 PRPF38BQ5VTL8 546 aaKnown RBP12.22□□□□□ -0.45
LINC01643-201ENST00000412218 KBTBD3Q8NAB2 608 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 SLC44A5Q8NCS7 719 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 ACER1Q8TDN7 264 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 PXYLP1Q8TE99 480 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 COA7Q96BR5 231 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
LINC01643-201ENST00000412218 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms