RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 SLC22A31A6NKX4 558 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 UPK3BL1B0FP48 263 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 CHURC1-FNTBB4DL54 471 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 UPK3BL2E5RIL1 263 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 LRIG2O94898 1065 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 CST3P01034 146 aaPredicted RBP6.45□□□□□ -1.38
CLHC1-205ENST00000411884 FSTP19883 344 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 PRAMEF13Q5VWM6 474 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 GMLQ99445 158 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 FOXQ1Q9C009 403 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 ANTXR1Q9H6X2 564 aa6.45□□□□□ -1.38
CLHC1-205ENST00000411884 NFIAQ12857 509 aa6.44□□□□□ -1.38
CLHC1-205ENST00000411884 CCDC81Q6ZN84 652 aa6.44□□□□□ -1.38
CLHC1-205ENST00000411884 ZAR1Q86SH2 424 aa6.44□□□□□ -1.38
CLHC1-205ENST00000411884 SLFN12Q8IYM2 578 aa6.44□□□□□ -1.38
CLHC1-205ENST00000411884 MFSD14AQ96MC6 490 aa6.44□□□□□ -1.38
CLHC1-205ENST00000411884 TBC1D32Q96NH3 1257 aa6.44□□□□□ -1.38
CLHC1-205ENST00000411884 DPH2Q9BQC3 489 aaPredicted RBP6.44□□□□□ -1.38
CLHC1-205ENST00000411884 MEIS3P2A8K0S8 358 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 LEFTY1O75610 366 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 IGLV1-40P01703 118 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 F13BP05160 661 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 FGRP09769 529 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 DNAJA1P31689 397 aaKnown RBP6.43□□□□□ -1.38
CLHC1-205ENST00000411884 ARID5AQ03989 594 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 OVOS1Q6IE37 1185 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 VPS37DQ86XT2 251 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 RBBP8NLQ8NC74 664 aaPredicted RBP6.43□□□□□ -1.38
CLHC1-205ENST00000411884 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 DUSP23Q9BVJ7 150 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 PRDM10Q9NQV6 1147 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 GMIPQ9P107 970 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 KLHL3Q9UH77 587 aa6.43□□□□□ -1.38
CLHC1-205ENST00000411884 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 SLITRK5O94991 958 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 IMPDH2P12268 514 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 ITGB7P26010 798 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 MLECQ14165 292 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 CDCP2Q5VXM1 449 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 OGFOD3Q6PK18 319 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 MCF2L2Q86YR7 1114 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 FBXL6Q8N531 539 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 TOP6BLQ8N6T0 577 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 MFSD2AQ8NA29 543 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 TMEM40Q8WWA1 233 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 ATG4CQ96DT6 458 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 SRRTQ9BXP5 876 aaKnown RBP6.42□□□□□ -1.38
CLHC1-205ENST00000411884 SEMA6BQ9H3T3 888 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 CNNM2Q9H8M5 875 aa6.42□□□□□ -1.38
CLHC1-205ENST00000411884 GSC2O15499 205 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 FAM87AP0C7U9 286 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 GIPRP48546 466 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 YARSP54577 528 aaKnown RBP6.41□□□□□ -1.38
CLHC1-205ENST00000411884 LRRFIP1Q32MZ4 808 aaKnown RBP6.41□□□□□ -1.38
CLHC1-205ENST00000411884 ARSHQ5FYA8 562 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 PRSS36Q5K4E3 855 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 FBXW10Q5XX13 1052 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 FAM214BQ7L5A3 538 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 SLC51AQ86UW1 340 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 RIN3Q8TB24 985 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 SHKBP1Q8TBC3 707 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 XAGE3Q8WTP9 111 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 PPP1R13LQ8WUF5 828 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 SHDQ96IW2 340 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 MIPEPQ99797 713 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 STRIP2Q9ULQ0 834 aa6.41□□□□□ -1.38
CLHC1-205ENST00000411884 WDR64B1ANS9 1081 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 EOMESO95936 686 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 NME1P15531 152 aaKnown RBP6.4□□□□□ -1.38
CLHC1-205ENST00000411884 EIF6P56537 245 aaKnown RBP6.4□□□□□ -1.38
CLHC1-205ENST00000411884 LETMD1Q6P1Q0 360 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 RUFY4Q6ZNE9 571 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 ZNF765Q7L2R6 523 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 NLRC3Q7RTR2 1065 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 LSRQ86X29 649 aaPredicted RBP6.4□□□□□ -1.38
CLHC1-205ENST00000411884 ZDHHC13Q8IUH4 622 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 DNAJB8Q8NHS0 232 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 CYB5D2Q8WUJ1 264 aa6.4□□□□□ -1.38
CLHC1-205ENST00000411884 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.4□□□□□ -1.38
CLHC1-205ENST00000411884 CNTNAP4Q9C0A0 1308 aa6.4□□□□□ -1.39
CLHC1-205ENST00000411884 PRR19A6NJB7 356 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 RBAK-RBAKDNI3L0D1 243 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 TNFRSF10CO14798 259 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 RGS13O14921 159 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 ACRP10323 421 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 GIMAP7Q8NHV1 300 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 BAHD1Q8TBE0 780 aaPredicted RBP6.39□□□□□ -1.39
CLHC1-205ENST00000411884 CPLX3Q8WVH0 158 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 CCDC74BQ96LY2 380 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 SLC9A7Q96T83 725 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 KIF2CQ99661 725 aa6.39□□□□□ -1.39
CLHC1-205ENST00000411884 COL17A1Q9UMD9 1497 aaPredicted RBP6.39□□□□□ -1.39
CLHC1-205ENST00000411884 UBOX5O94941 541 aa6.38□□□□□ -1.39
CLHC1-205ENST00000411884 RAG1P15918 1043 aa6.38□□□□□ -1.39
CLHC1-205ENST00000411884 POLR2BP30876 1174 aaKnown RBP6.38□□□□□ -1.39
CLHC1-205ENST00000411884 INTS3Q68E01 1043 aaKnown RBP6.38□□□□□ -1.39
CLHC1-205ENST00000411884 CDH24Q86UP0 819 aa6.38□□□□□ -1.39
CLHC1-205ENST00000411884 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms