RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 IFNAR1P17181 557 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 USP5P45974 858 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 SSRP1Q08945 709 aaKnown RBP7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 TRIM29Q14134 588 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 NTRK3Q16288 839 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 CCDC178Q5BJE1 867 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 MICU3Q86XE3 530 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 TRIM22Q8IYM9 498 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 FANCBQ8NB91 859 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 NKX2-3Q8TAU0 364 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 ZSCAN10Q96SZ4 725 aaPredicted RBP7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 ALG1Q9BT22 464 aa7.3□□□□□ -1.24
GTF3C3-202ENST00000409364 FAM205AQ6ZU69 1335 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 GPR75-ASB3A0A0A6YYF3 556 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 LCE2BO14633 110 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 FMNL1O95466 1100 aaPredicted RBP7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 CDC27P30260 824 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 PSEN1P49768 467 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 SEC23AQ15436 765 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 RTN1Q16799 776 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 CATIPQ7Z7H3 387 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 EYA3Q99504 573 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 ZNF287Q9HBT7 754 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 SENP2Q9HC62 589 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 FAM217BQ9NTX9 383 aaPredicted RBP7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 MCM9Q9NXL9 1143 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 JAG2Q9Y219 1238 aa7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.29□□□□□ -1.24
GTF3C3-202ENST00000409364 STK36Q9NRP7 1315 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 H0YIN7 160 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 NASPP49321 788 aaPredicted RBP7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 PTPN5P54829 565 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 GUCY1B3Q02153 619 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 SLC15A2Q16348 729 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 TMEM132AQ24JP5 1023 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 MFSD14BQ5SR56 506 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 IFIT1BQ5T764 474 aaKnown RBP7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 C12orf60Q5U649 245 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 STYK1Q6J9G0 422 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 POTEEQ6S8J3 1075 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 DPP8Q6V1X1 898 aaPredicted RBP7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 RAB11FIP4Q86YS3 637 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 ZNF654Q8IZM8 581 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 STK11IPQ8N1F8 1099 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 CRACR2BQ8N4Y2 399 aaPredicted RBP7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 GPR101Q96P66 508 aaPredicted RBP7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 CAMKK2Q96RR4 588 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 ZKSCAN3Q9BRR0 538 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 TSPY26PQ9H489 355 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 DDX19AQ9NUU7 478 aaKnown RBP7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 RBM28Q9NW13 759 aaKnown RBP7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 STK32BQ9NY57 414 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 RTEL1Q9NZ71 1219 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 NID2Q14112 1375 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 MROH7-TTC4A0A0A0MT08 1334 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 TNKSO95271 1327 aa7.28□□□□□ -1.24
GTF3C3-202ENST00000409364 CYP2D7A0A087X1C5 515 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 PPFIA3O75145 1194 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 DEXIO95424 95 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 RXRAP19793 462 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 FOSBP53539 338 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 AKAP17AQ02040 695 aaKnown RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 SAFBQ15424 915 aaKnown RBP eCLIP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 DIXDC1Q155Q3 683 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 KRT40Q6A162 431 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 CCDC144CPQ8IYA2 1237 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 ZNF444Q8N0Y2 327 aaPredicted RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 ENAHQ8N8S7 591 aaPredicted RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 SH3RF3Q8TEJ3 882 aaPredicted RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 NUP133Q8WUM0 1156 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 ZNF622Q969S3 477 aaKnown RBP eCLIP7.27□□□□□ -1.253e-7■■□□□ 13.8
GTF3C3-202ENST00000409364 MYL10Q9BUA6 226 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 SLC26A6Q9BXS9 759 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 MKNK2Q9HBH9 465 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 UBR3Q6ZT12 1888 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 MYH7P12883 1935 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 C4AP0C0L4 1744 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 TSPY2A6NKD2 308 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 PRDM1O75626 825 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 DDAH1O94760 285 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 YEATS4O95619 227 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 POLR3DP05423 398 aaPredicted RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 USP17L8P0C7I0 530 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 XBP1P17861 261 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 U2AF2P26368 475 aaKnown RBP eCLIP7.27□□□□□ -1.259e-7■■■■□ 23.5
GTF3C3-202ENST00000409364 BTDP43251 543 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 GTF2IP78347 998 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 KIF23Q02241 960 aaPredicted RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 CEBPZQ03701 1054 aaKnown RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 GNL2Q13823 731 aaKnown RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 SF3A1Q15459 793 aaKnown RBP7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 GRIK5Q16478 980 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 UVSSAQ2YD98 709 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 MYSM1Q5VVJ2 828 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 CC2D2BQ6DHV5 1058 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 OTUD7BQ6GQQ9 843 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 PODNQ7Z5L7 613 aa7.27□□□□□ -1.25
GTF3C3-202ENST00000409364 DGKHQ86XP1 1220 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms