RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 ZSWIM6Q9HCJ5 1215 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 PTPRFP10586 1907 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 B4E1Z4 1266 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 PRDM1O75626 825 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 SLURP2P0DP57 97 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 ZNF444Q8N0Y2 327 aaPredicted RBP24.19■■□□□ 1.46
VSX1-203ENST00000409285 MTA3Q9BTC8 594 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 PPP1R12BO60237 982 aaPredicted RBP24.18■■□□□ 1.46
VSX1-203ENST00000409285 MAP3K11Q16584 847 aa24.18■■□□□ 1.46
VSX1-203ENST00000409285 CERKLQ49MI3 558 aaPredicted RBP24.18■■□□□ 1.46
VSX1-203ENST00000409285 DLK2Q6UY11 383 aa24.18■■□□□ 1.46
VSX1-203ENST00000409285 STK11IPQ8N1F8 1099 aa24.18■■□□□ 1.46
VSX1-203ENST00000409285 GINM1Q9NU53 330 aa24.18■■□□□ 1.46
VSX1-203ENST00000409285 TRAF5O00463 557 aa24.17■■□□□ 1.46
VSX1-203ENST00000409285 KDM4AO75164 1064 aa24.17■■□□□ 1.46
VSX1-203ENST00000409285 CASTP20810 708 aaKnown RBP24.17■■□□□ 1.46
VSX1-203ENST00000409285 MCM5P33992 734 aa24.17■■□□□ 1.46
VSX1-203ENST00000409285 BLOC1S2Q6QNY1 142 aa24.17■■□□□ 1.46
VSX1-203ENST00000409285 KLRG1Q96E93 195 aa24.17■■□□□ 1.46
VSX1-203ENST00000409285 TOMM22Q9NS69 142 aa24.17■■□□□ 1.46
VSX1-203ENST00000409285 PASKQ96RG2 1323 aa24.16■■□□□ 1.46
VSX1-203ENST00000409285 RANBP6O60518 1105 aaKnown RBP24.16■■□□□ 1.46
VSX1-203ENST00000409285 FKBP1BP68106 108 aa24.16■■□□□ 1.46
VSX1-203ENST00000409285 RRP12Q5JTH9 1297 aaKnown RBP24.16■■□□□ 1.46
VSX1-203ENST00000409285 RUFY3Q7L099 469 aa24.16■■□□□ 1.46
VSX1-203ENST00000409285 DHX32Q7L7V1 743 aaKnown RBP24.16■■□□□ 1.46
VSX1-203ENST00000409285 NEDD1Q8NHV4 660 aa24.16■■□□□ 1.46
VSX1-203ENST00000409285 TCP11L1Q9NUJ3 509 aa24.16■■□□□ 1.46
VSX1-203ENST00000409285 ZSWIM5Q9P217 1185 aa24.16■■□□□ 1.46
VSX1-203ENST00000409285 TSPY2A6NKD2 308 aa24.15■■□□□ 1.46
VSX1-203ENST00000409285 CTNND1O60716 968 aaKnown RBP24.15■■□□□ 1.46
VSX1-203ENST00000409285 USP2O75604 605 aaPredicted RBP24.15■■□□□ 1.46
VSX1-203ENST00000409285 CAP2P40123 477 aa24.15■■□□□ 1.46
VSX1-203ENST00000409285 EXOSC10Q01780 885 aaKnown RBP24.15■■□□□ 1.46
VSX1-203ENST00000409285 RABEP1Q15276 862 aa24.15■■□□□ 1.46
VSX1-203ENST00000409285 FBXL16Q8N461 479 aa24.15■■□□□ 1.46
VSX1-203ENST00000409285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.15■■□□□ 1.46
VSX1-203ENST00000409285 NKX2-3Q8TAU0 364 aa24.15■■□□□ 1.46
VSX1-203ENST00000409285 CYP46A1Q9Y6A2 500 aa24.15■■□□□ 1.46
VSX1-203ENST00000409285 UNCXA6NJT0 531 aa24.14■■□□□ 1.46
VSX1-203ENST00000409285 TSPY3P0CV98 308 aa24.14■■□□□ 1.46
VSX1-203ENST00000409285 TSPY8P0CW00 308 aa24.14■■□□□ 1.46
VSX1-203ENST00000409285 AKR1B1P15121 316 aa24.14■■□□□ 1.46
VSX1-203ENST00000409285 RPS6KB1P23443 525 aa24.14■■□□□ 1.46
VSX1-203ENST00000409285 TFAP4Q01664 338 aa24.14■■□□□ 1.46
VSX1-203ENST00000409285 COL9A3Q14050 684 aaPredicted RBP24.14■■□□□ 1.46
VSX1-203ENST00000409285 RRP1BQ14684 758 aaKnown RBP24.14■■□□□ 1.46
VSX1-203ENST00000409285 TMEM179Q6ZVK1 233 aa24.14■■□□□ 1.46
VSX1-203ENST00000409285 IGKV6D-41A0A0C4DH26 115 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 IREB2P48200 963 aaKnown RBP24.13■■□□□ 1.45
VSX1-203ENST00000409285 ANTXR2P58335 489 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 ABCB5Q2M3G0 1257 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 NOL9Q5SY16 702 aaKnown RBP24.13■■□□□ 1.45
VSX1-203ENST00000409285 CYB5R4Q7L1T6 521 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 IQCA1Q86XH1 822 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 WRNIP1Q96S55 665 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.13■■□□□ 1.45
VSX1-203ENST00000409285 ASNSP08243 561 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 HSPA6P17066 643 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 NOVP48745 357 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 CCDC178Q5BJE1 867 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 FAM47AQ5JRC9 791 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 TMEM87BQ96K49 555 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 ZBTB21Q9ULJ3 1066 aa24.13■■□□□ 1.45
VSX1-203ENST00000409285 PPP4R3BQ5MIZ7 849 aa24.12■■□□□ 1.45
VSX1-203ENST00000409285 AGXT2Q9BYV1 514 aa24.12■■□□□ 1.45
VSX1-203ENST00000409285 UPF3BQ9BZI7 483 aaKnown RBP24.12■■□□□ 1.45
VSX1-203ENST00000409285 ALDH8A1Q9H2A2 487 aaPredicted RBP24.12■■□□□ 1.45
VSX1-203ENST00000409285 PRC1O43663 620 aa24.11■■□□□ 1.45
VSX1-203ENST00000409285 SART3Q15020 963 aaKnown RBP24.11■■□□□ 1.45
VSX1-203ENST00000409285 ARMC9Q7Z3E5 817 aa24.11■■□□□ 1.45
VSX1-203ENST00000409285 SCYL3Q8IZE3 742 aa24.11■■□□□ 1.45
VSX1-203ENST00000409285 UBAC1Q9BSL1 405 aa24.11■■□□□ 1.45
VSX1-203ENST00000409285 CABP5Q9NP86 173 aa24.11■■□□□ 1.45
VSX1-203ENST00000409285 IL17RBQ9NRM6 502 aa24.11■■□□□ 1.45
VSX1-203ENST00000409285 GDF11O95390 407 aa24.1■■□□□ 1.45
VSX1-203ENST00000409285 GH2P01242 217 aa24.1■■□□□ 1.45
VSX1-203ENST00000409285 INPP5BP32019 993 aa24.1■■□□□ 1.45
VSX1-203ENST00000409285 FMR1Q06787 632 aaKnown RBP eCLIP24.1■■□□□ 1.45
VSX1-203ENST00000409285 TTC14Q96N46 770 aa24.1■■□□□ 1.45
VSX1-203ENST00000409285 ZSCAN10Q96SZ4 725 aaPredicted RBP24.1■■□□□ 1.45
VSX1-203ENST00000409285 ANGEL1Q9UNK9 670 aaKnown RBP24.1■■□□□ 1.45
VSX1-203ENST00000409285 TNKSO95271 1327 aa24.1■■□□□ 1.45
VSX1-203ENST00000409285 CELF2O95319 508 aaKnown RBP24.09■■□□□ 1.45
VSX1-203ENST00000409285 GUCY1A2P33402 732 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 JAG1P78504 1218 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 MAP3K9P80192 1104 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 LDLRAD1Q5T700 205 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.09■■□□□ 1.45
VSX1-203ENST00000409285 DGKHQ86XP1 1220 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 ANKRD13AQ8IZ07 590 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 IGDCC4Q8TDY8 1250 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 ANKS1AQ92625 1134 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 KANSL2Q9H9L4 492 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 GBA2Q9HCG7 927 aaPredicted RBP24.09■■□□□ 1.45
VSX1-203ENST00000409285 FZD1Q9UP38 647 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 LOC285556D6RIA3 1793 aa24.09■■□□□ 1.45
VSX1-203ENST00000409285 MPHOSPH10O00566 681 aaKnown RBP24.08■■□□□ 1.45
VSX1-203ENST00000409285 CPA1P15085 419 aa24.08■■□□□ 1.45
VSX1-203ENST00000409285 APLP1P51693 650 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms