RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
SHANK2-203ENST00000409161 STX17P56962 302 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 AMFRQ9UKV5 643 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 CASC4Q6P4E1 433 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 STK38LQ9Y2H1 464 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 PSPC1Q8WXF1 523 aaKnown RBP13.42□□□□□ -0.26
SHANK2-203ENST00000409161 CCDC169A6NNP5 214 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 TNNI2P48788 182 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 GABPAQ06546 454 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 SLMAPQ14BN4 828 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 TRIM42Q8IWZ5 723 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 IWS1Q96ST2 819 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 TPX2Q9ULW0 747 aaKnown RBP13.42□□□□□ -0.26
SHANK2-203ENST00000409161 ARHGAP42A6NI28 874 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 NBPF5PQ86XG9 351 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 FAM212AQ96EL1 285 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 CENPKQ9BS16 269 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 HMGB3O15347 200 aaKnown RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 ATP8B1O43520 1251 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 RNF8O76064 485 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 TUBB6Q9BUF5 446 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 EFHD1Q9BUP0 239 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 SPECC1L-ADORA2AF8WAN1 911 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 CA8P35219 290 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 DACT3Q96B18 629 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 TTC4O95801 387 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 IGHDP01880 384 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 RSAD2Q8WXG1 361 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 CCDC68Q9H2F9 335 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 POSTNQ15063 836 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 TRMT1LQ7Z2T5 733 aaKnown RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 HELBQ8NG08 1087 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 IPO11Q9UI26 975 aaKnown RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-203ENST00000409161 PDZD8Q8NEN9 1154 aa13.41□□□□□ -0.26
SHANK2-203ENST00000409161 CARD6Q9BX69 1037 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 PLXNC1O60486 1568 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 THAP12O43422 761 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 CCNT1O60563 726 aaKnown RBP13.4□□□□□ -0.26
SHANK2-203ENST00000409161 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 POLR2DO15514 142 aaKnown RBP13.4□□□□□ -0.26
SHANK2-203ENST00000409161 LMNB2Q03252 620 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 C8orf34Q49A92 452 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 CXorf38Q8TB03 319 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 PDE4DQ08499 809 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 TXLNGQ9NUQ3 528 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 ZNF202O95125 648 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 TSC1Q92574 1164 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 CARD10Q9BWT7 1032 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
SHANK2-203ENST00000409161 N4BP1O75113 896 aaKnown RBP13.4□□□□□ -0.27
SHANK2-203ENST00000409161 KRT9P35527 623 aa13.4□□□□□ -0.27
SHANK2-203ENST00000409161 SEPT2Q15019 361 aa13.4□□□□□ -0.27
SHANK2-203ENST00000409161 RNF34Q969K3 372 aa13.4□□□□□ -0.27
SHANK2-203ENST00000409161 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.27
SHANK2-203ENST00000409161 SNRKQ9NRH2 765 aa13.4□□□□□ -0.27
SHANK2-203ENST00000409161 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 CTTNBP2NLQ9P2B4 639 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 WASLO00401 505 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-203ENST00000409161 CEP104O60308 925 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 RPS6KB1P23443 525 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 CCDC13Q8IYE1 715 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 LRGUKQ96M69 825 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
SHANK2-203ENST00000409161 TSHZ3Q63HK5 1081 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 ANKRD2Q9GZV1 360 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 ANKFY1Q9P2R3 1169 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
SHANK2-203ENST00000409161 SERPINB6P35237 376 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 PLCD3Q8N3E9 789 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 FBXO41Q8TF61 875 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 CNOT10Q9H9A5 744 aaKnown RBP13.39□□□□□ -0.27
SHANK2-203ENST00000409161 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-203ENST00000409161 PDZD4Q76G19 769 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-203ENST00000409161 MYO1AQ9UBC5 1043 aa13.39□□□□□ -0.27
SHANK2-203ENST00000409161 SCOCQ9UIL1 159 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 SSH2Q76I76 1423 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 RFC4P35249 363 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 PALM2Q8IXS6 379 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 BACH1O14867 736 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms