RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 RRP15Q9Y3B9 282 aaKnown RBP17.14■□□□□ 0.33
ATG4B-206ENST00000405546 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 E2F4Q16254 413 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 TICAM2Q86XR7 235 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 ARFGAP3Q9NP61 516 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 LOC102724428A0A0B4J2F2 783 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 MAGEB6P1A0A0J9YX57 407 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 TOP1P11387 765 aaKnown RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 GTF2A1P52655 376 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 SIK1P57059 783 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 HOOK1Q9UJC3 728 aaKnown RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 KCPQ6ZWJ8 1503 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 A0A0U1RQJ8 604 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 REXO1L1PQ8IX06 675 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 ZNF34Q8IZ26 560 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 OXER1Q8TDS5 423 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
ATG4B-206ENST00000405546 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-206ENST00000405546 MYL5Q02045 173 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 TRIM65Q6PJ69 517 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 CPLX3Q8WVH0 158 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 STAMQ92783 540 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 LZTFL1Q9NQ48 299 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 LOC102724159A0A0B4J2E5 919 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 TCRBV5S4A2TA0A5A2 114 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 CASQ1P31415 396 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 PPARAQ07869 468 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 PWP2Q15269 919 aaKnown RBP17.12■□□□□ 0.33
ATG4B-206ENST00000405546 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 ANKRD18AQ8IVF6 992 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 FANCBQ8NB91 859 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 DHX58Q96C10 678 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 HINFPQ9BQA5 517 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 FAM217BQ9NTX9 383 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-206ENST00000405546 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
ATG4B-206ENST00000405546 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 RHOXF2BP0C7M4 288 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 STX17P56962 302 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 RHOXF2Q9BQY4 288 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 RNF41Q9H4P4 317 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-206ENST00000405546 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 KCNQ2O43526 872 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 FBXL16Q8N461 479 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 ESR2Q92731 530 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 GDAP1L1Q96MZ0 367 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 OSBPL5Q9H0X9 879 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-206ENST00000405546 COL18A1P39060 1754 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 NTRK3Q16288 839 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 CCDC12Q8WUD4 166 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-206ENST00000405546 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 CDC5LQ99459 802 aaKnown RBP17.11■□□□□ 0.33
ATG4B-206ENST00000405546 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
ATG4B-206ENST00000405546 BAZ2BQ9UIF8 2168 aaKnown RBP17.1■□□□□ 0.33
ATG4B-206ENST00000405546 CUTAO60888 179 aa17.1■□□□□ 0.33
ATG4B-206ENST00000405546 XBP1P17861 261 aa17.1■□□□□ 0.33
ATG4B-206ENST00000405546 MTF1Q14872 753 aa17.1■□□□□ 0.33
ATG4B-206ENST00000405546 IFIT1BQ5T764 474 aaKnown RBP17.1■□□□□ 0.33
ATG4B-206ENST00000405546 TNKSO95271 1327 aa17.1■□□□□ 0.33
ATG4B-206ENST00000405546 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
ATG4B-206ENST00000405546 TOGARAM2Q6ZUX3 1019 aa17.1■□□□□ 0.33
ATG4B-206ENST00000405546 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
ATG4B-206ENST00000405546 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 FMNL1O95466 1100 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-206ENST00000405546 FGFR2P21802 821 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 CASP1P29466 404 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 LIFRP42702 1097 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 AK7Q96M32 723 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 ADAMTS7Q9UKP4 1686 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 COBLO75128 1261 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 IFNAR1P17181 557 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 ZNF174Q15697 407 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 LONRF2Q1L5Z9 754 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 RASSF8Q8NHQ8 419 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 PPP6R2O75170 966 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 DEXIO95424 95 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 MMP1P03956 469 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 PTPAQ15257 358 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 ERFEQ4G0M1 354 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 ADGRA1Q86SQ6 560 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 METTL16Q86W50 562 aaKnown RBP17.09■□□□□ 0.33
ATG4B-206ENST00000405546 IQCA1Q86XH1 822 aa17.09■□□□□ 0.33
ATG4B-206ENST00000405546 GNAT2P19087 354 aa17.08■□□□□ 0.33
ATG4B-206ENST00000405546 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.33
ATG4B-206ENST00000405546 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.33
ATG4B-206ENST00000405546 SGMS1Q86VZ5 419 aa17.08■□□□□ 0.33
ATG4B-206ENST00000405546 FOXP4Q8IVH2 680 aaPredicted RBP17.08■□□□□ 0.33
ATG4B-206ENST00000405546 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.33
ATG4B-206ENST00000405546 FAN1Q9Y2M0 1017 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms