RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 A0A0G2JLL6 359 aaPredicted RBP23.03■■□□□ 1.28
RTN4-207ENST00000402434 USP17L5A8MUK1 530 aa23.03■■□□□ 1.28
RTN4-207ENST00000402434 BTBD19C9JJ37 291 aa23.03■■□□□ 1.28
RTN4-207ENST00000402434 PRRT2Q7Z6L0 340 aaPredicted RBP23.03■■□□□ 1.28
RTN4-207ENST00000402434 RILPL2Q969X0 211 aa23.03■■□□□ 1.28
RTN4-207ENST00000402434 R3HDMLQ9H3Y0 253 aa23.03■■□□□ 1.28
RTN4-207ENST00000402434 ATAD5Q96QE3 1844 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 PATL2C9JE40 543 aaKnown RBP23.02■■□□□ 1.28
RTN4-207ENST00000402434 GDF11O95390 407 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 CERKLQ49MI3 558 aaPredicted RBP23.02■■□□□ 1.28
RTN4-207ENST00000402434 SBK1Q52WX2 424 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 AMOTL1Q8IY63 956 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 ZNF280CQ8ND82 737 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 HELLSQ9NRZ9 838 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 ARPP21Q9UBL0 812 aaPredicted RBP23.02■■□□□ 1.28
RTN4-207ENST00000402434 SWAP70Q9UH65 585 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 ZBTB21Q9ULJ3 1066 aa23.02■■□□□ 1.28
RTN4-207ENST00000402434 CASP8AP2Q9UKL3 1982 aa23.01■■□□□ 1.27
RTN4-207ENST00000402434 CYP2D7A0A087X1C5 515 aa23.01■■□□□ 1.27
RTN4-207ENST00000402434 CENPBP07199 599 aaPredicted RBP23.01■■□□□ 1.27
RTN4-207ENST00000402434 SHROOM1Q2M3G4 852 aaPredicted RBP23.01■■□□□ 1.27
RTN4-207ENST00000402434 CENPQQ7L2Z9 268 aaPredicted RBP23.01■■□□□ 1.27
RTN4-207ENST00000402434 ANKRD23Q86SG2 305 aa23.01■■□□□ 1.27
RTN4-207ENST00000402434 WDR18Q9BV38 432 aa23.01■■□□□ 1.27
RTN4-207ENST00000402434 EPB41L4AQ9HCS5 686 aaPredicted RBP23.01■■□□□ 1.27
RTN4-207ENST00000402434 TRIM75PA6NK02 468 aa23■■□□□ 1.27
RTN4-207ENST00000402434 SMIM22K7EJ46 135 aa23■■□□□ 1.27
RTN4-207ENST00000402434 GPR25O00155 361 aa23■■□□□ 1.27
RTN4-207ENST00000402434 SPP2Q13103 211 aa23■■□□□ 1.27
RTN4-207ENST00000402434 CRHR2Q13324 411 aa23■■□□□ 1.27
RTN4-207ENST00000402434 FASTKD5Q7L8L6 764 aaKnown RBP23■■□□□ 1.27
RTN4-207ENST00000402434 DYNLL2Q96FJ2 89 aa23■■□□□ 1.27
RTN4-207ENST00000402434 GH2P01242 217 aa22.99■■□□□ 1.27
RTN4-207ENST00000402434 GPAT2Q6NUI2 795 aa22.99■■□□□ 1.27
RTN4-207ENST00000402434 IFNL3Q8IZI9 196 aa22.99■■□□□ 1.27
RTN4-207ENST00000402434 FAM227BQ96M60 508 aa22.99■■□□□ 1.27
RTN4-207ENST00000402434 AS3MTQ9HBK9 375 aa22.99■■□□□ 1.27
RTN4-207ENST00000402434 PTPRFP10586 1907 aa22.99■■□□□ 1.27
RTN4-207ENST00000402434 APPP05067 770 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 SDSP20132 328 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 ABCB5Q2M3G0 1257 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 MCMDC2Q4G0Z9 681 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 TTC22Q5TAA0 569 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 C16orf86Q6ZW13 317 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 SLC44A5Q8NCS7 719 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 A0A0D9SFI3 127 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 FOXP2O15409 715 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 CDK8P49336 464 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 TAF1CQ15572 869 aaPredicted RBP22.98■■□□□ 1.27
RTN4-207ENST00000402434 CCDC129Q6ZRS4 1044 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 NACAP1Q9BZK3 213 aa22.98■■□□□ 1.27
RTN4-207ENST00000402434 PDHXO00330 501 aa22.97■■□□□ 1.27
RTN4-207ENST00000402434 NEFLP07196 543 aa22.97■■□□□ 1.27
RTN4-207ENST00000402434 GSPT1P15170 499 aaKnown RBP22.97■■□□□ 1.27
RTN4-207ENST00000402434 TDO2P48775 406 aa22.97■■□□□ 1.27
RTN4-207ENST00000402434 NMIQ13287 307 aaPredicted RBP22.97■■□□□ 1.27
RTN4-207ENST00000402434 SH3D19Q5HYK7 790 aa22.97■■□□□ 1.27
RTN4-207ENST00000402434 ZNF296Q8WUU4 475 aaPredicted RBP22.97■■□□□ 1.27
RTN4-207ENST00000402434 ZFYVE28Q9HCC9 887 aa22.97■■□□□ 1.27
RTN4-207ENST00000402434 CABP5Q9NP86 173 aa22.97■■□□□ 1.27
RTN4-207ENST00000402434 BACE1P56817 501 aa22.96■■□□□ 1.27
RTN4-207ENST00000402434 PROCA1Q8NCQ7 364 aaPredicted RBP22.96■■□□□ 1.27
RTN4-207ENST00000402434 CCDC17Q96LX7 622 aa22.96■■□□□ 1.27
RTN4-207ENST00000402434 SLC45A1Q9Y2W3 748 aa22.96■■□□□ 1.27
RTN4-207ENST00000402434 ROBO3Q96MS0 1386 aa22.96■■□□□ 1.27
RTN4-207ENST00000402434 HIP1O00291 1037 aa22.95■■□□□ 1.26
RTN4-207ENST00000402434 TLR2O60603 784 aa22.95■■□□□ 1.26
RTN4-207ENST00000402434 GUCY1A2P33402 732 aa22.95■■□□□ 1.26
RTN4-207ENST00000402434 MINDY4BA8MYZ0 360 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 C19orf81C9J6K1 198 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 USP17L10C9JJH3 530 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 FKTNO75072 461 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 HMGCS2P54868 508 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 GADL1Q6ZQY3 521 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 NAPBQ9H115 298 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 AGTPBP1Q9UPW5 1226 aa22.94■■□□□ 1.26
RTN4-207ENST00000402434 MTMR2Q13614 643 aa22.93■■□□□ 1.26
RTN4-207ENST00000402434 RAB3GAP1Q15042 981 aa22.93■■□□□ 1.26
RTN4-207ENST00000402434 ALX1Q15699 326 aa22.93■■□□□ 1.26
RTN4-207ENST00000402434 VPS53Q5VIR6 699 aa22.93■■□□□ 1.26
RTN4-207ENST00000402434 ZNF589Q86UQ0 364 aaPredicted RBP22.93■■□□□ 1.26
RTN4-207ENST00000402434 CCDC136Q96JN2 1154 aa22.93■■□□□ 1.26
RTN4-207ENST00000402434 SEPT2Q15019 361 aa22.92■■□□□ 1.26
RTN4-207ENST00000402434 TMEM179Q6ZVK1 233 aa22.92■■□□□ 1.26
RTN4-207ENST00000402434 DIAPH3Q9NSV4 1193 aa22.92■■□□□ 1.26
RTN4-207ENST00000402434 CCDC171Q6TFL3 1326 aa22.92■■□□□ 1.26
RTN4-207ENST00000402434 AKR1B1P15121 316 aa22.92■■□□□ 1.26
RTN4-207ENST00000402434 TREML2Q5T2D2 321 aa22.92■■□□□ 1.26
RTN4-207ENST00000402434 ADGRA2Q96PE1 1338 aa22.91■■□□□ 1.26
RTN4-207ENST00000402434 MPHOSPH10O00566 681 aaKnown RBP22.91■■□□□ 1.26
RTN4-207ENST00000402434 HSPD1P10809 573 aaKnown RBP22.91■■□□□ 1.26
RTN4-207ENST00000402434 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
RTN4-207ENST00000402434 CWC27Q6UX04 472 aaKnown RBP22.91■■□□□ 1.26
RTN4-207ENST00000402434 PARK7Q99497 189 aaKnown RBP22.91■■□□□ 1.26
RTN4-207ENST00000402434 KIAA1683Q9H0B3 1180 aa22.91■■□□□ 1.26
RTN4-207ENST00000402434 LOC285556D6RIA3 1793 aa22.91■■□□□ 1.26
RTN4-207ENST00000402434 MYH8P13535 1937 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 RASA1P20936 1047 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 SP3Q02447 781 aa22.9■■□□□ 1.26
RTN4-207ENST00000402434 PPARAQ07869 468 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms