RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 CPLX2Q6PUV4 134 aaKnown RBP16.14■□□□□ 0.17
ATG3-202ENST00000402314 PUF60Q9UHX1 559 aaKnown RBP16.14■□□□□ 0.17
ATG3-202ENST00000402314 COL4A1P02462 1669 aa16.14■□□□□ 0.17
ATG3-202ENST00000402314 TADA3O75528 432 aa16.14■□□□□ 0.17
ATG3-202ENST00000402314 SLC4A8Q2Y0W8 1093 aa16.14■□□□□ 0.17
ATG3-202ENST00000402314 FOXR1Q6PIV2 292 aa16.14■□□□□ 0.17
ATG3-202ENST00000402314 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
ATG3-202ENST00000402314 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.14■□□□□ 0.17
ATG3-202ENST00000402314 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
ATG3-202ENST00000402314 NTSR2O95665 410 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 CCDC150Q8NCX0 1101 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 MAP3K14Q99558 947 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 MYO1CO00159 1063 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 DYNLL1P63167 89 aaKnown RBP16.13■□□□□ 0.17
ATG3-202ENST00000402314 TRIM29Q14134 588 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 LONRF3Q496Y0 759 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 CC2D1AQ6P1N0 951 aaPredicted RBP16.13■□□□□ 0.17
ATG3-202ENST00000402314 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 PARD6BQ9BYG5 372 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 PARP3Q9Y6F1 533 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 ATRNO75882 1429 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 H3BQF6 201 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 CDKL5O76039 1030 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 SSRP1Q08945 709 aaKnown RBP16.13■□□□□ 0.17
ATG3-202ENST00000402314 FOXP4Q8IVH2 680 aaPredicted RBP16.13■□□□□ 0.17
ATG3-202ENST00000402314 WDR19Q8NEZ3 1342 aa16.13■□□□□ 0.17
ATG3-202ENST00000402314 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 NCAPHQ15003 741 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 ERFEQ4G0M1 354 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 VPS18Q9P253 973 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 BAZ2BQ9UIF8 2168 aaKnown RBP16.12■□□□□ 0.17
ATG3-202ENST00000402314 A0A0U1RQJ8 604 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 N4BP1O75113 896 aaKnown RBP16.12■□□□□ 0.17
ATG3-202ENST00000402314 KLRK1P26718 216 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 TOB1P50616 345 aaPredicted RBP16.12■□□□□ 0.17
ATG3-202ENST00000402314 DIS3L2Q8IYB7 885 aaKnown RBP16.12■□□□□ 0.17
ATG3-202ENST00000402314 GRAMD1CQ8IYS0 662 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 ATRIPQ8WXE1 791 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 ADAM21Q9UKJ8 722 aa16.12■□□□□ 0.17
ATG3-202ENST00000402314 PSDA5PKW4 1024 aaPredicted RBP16.11■□□□□ 0.17
ATG3-202ENST00000402314 WTAPQ15007 396 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 RASSF4Q9H2L5 321 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 LZTFL1Q9NQ48 299 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 MYH3P11055 1940 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 NLRP12P59046 1061 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 ALX1Q15699 326 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 RTN1Q16799 776 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 TOGARAM2Q6ZUX3 1019 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 TXLNBQ8N3L3 684 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 CPLX3Q8WVH0 158 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
ATG3-202ENST00000402314 CASQ1P31415 396 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
ATG3-202ENST00000402314 USP49Q70CQ1 688 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
ATG3-202ENST00000402314 REXO1L1PQ8IX06 675 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 DHX58Q96C10 678 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 ARFGAP3Q9NP61 516 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
ATG3-202ENST00000402314 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
ATG3-202ENST00000402314 LIFRP42702 1097 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 MTF1Q14872 753 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 IMPACTQ9P2X3 320 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 PCDHB6Q9Y5E3 794 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 PPARAQ07869 468 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 GPS2Q13227 327 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 HSD3B7Q9H2F3 369 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 PDE11AQ9HCR9 933 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 PPP2R2CQ9Y2T4 447 aa16.1■□□□□ 0.17
ATG3-202ENST00000402314 C4AP0C0L4 1744 aa16.09■□□□□ 0.17
ATG3-202ENST00000402314 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
ATG3-202ENST00000402314 NOSTRINQ8IVI9 506 aa16.09■□□□□ 0.17
ATG3-202ENST00000402314 HPSEQ9Y251 543 aa16.09■□□□□ 0.17
ATG3-202ENST00000402314 FMNL1O95466 1100 aaPredicted RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 PDE4BQ07343 736 aa16.09■□□□□ 0.17
ATG3-202ENST00000402314 NOM1Q5C9Z4 860 aaKnown RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 CCDC12Q8WUD4 166 aaPredicted RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 CELF1Q92879 486 aaKnown RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 KCNH3Q9ULD8 1083 aa16.09■□□□□ 0.17
ATG3-202ENST00000402314 PCDHA5Q9Y5H7 936 aa16.09■□□□□ 0.17
ATG3-202ENST00000402314 GOLGB1Q14789 3259 aaKnown RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
ATG3-202ENST00000402314 TAF1P21675 1872 aa16.08■□□□□ 0.17
ATG3-202ENST00000402314 IFNAR1P17181 557 aa16.08■□□□□ 0.17
ATG3-202ENST00000402314 BMP6P22004 513 aa16.08■□□□□ 0.17
ATG3-202ENST00000402314 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.17
ATG3-202ENST00000402314 CNNM3Q8NE01 707 aa16.08■□□□□ 0.17
ATG3-202ENST00000402314 ZNF384Q8TF68 577 aa16.08■□□□□ 0.17
ATG3-202ENST00000402314 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms