RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 NCLP19338 710 aaKnown RBP29.88■■■□□ 2.37
CPNE1-205ENST00000401607 RASA1P20936 1047 aa29.88■■■□□ 2.37
CPNE1-205ENST00000401607 CDK8P49336 464 aa29.88■■■□□ 2.37
CPNE1-205ENST00000401607 RCSD1Q6JBY9 416 aa29.88■■■□□ 2.37
CPNE1-205ENST00000401607 LARGE2Q8N3Y3 721 aa29.88■■■□□ 2.37
CPNE1-205ENST00000401607 C8orf76Q96K31 380 aa29.88■■■□□ 2.37
CPNE1-205ENST00000401607 IL17RBQ9NRM6 502 aa29.88■■■□□ 2.37
CPNE1-205ENST00000401607 STK36Q9NRP7 1315 aa29.88■■■□□ 2.37
CPNE1-205ENST00000401607 FIBPO43427 364 aa29.87■■■□□ 2.37
CPNE1-205ENST00000401607 IARSP41252 1262 aaKnown RBP29.87■■■□□ 2.37
CPNE1-205ENST00000401607 DALRD3Q5D0E6 543 aaKnown RBP29.87■■■□□ 2.37
CPNE1-205ENST00000401607 CATIPQ7Z7H3 387 aa29.87■■■□□ 2.37
CPNE1-205ENST00000401607 VPS33BQ9H267 617 aa29.87■■■□□ 2.37
CPNE1-205ENST00000401607 PSDA5PKW4 1024 aaPredicted RBP29.87■■■□□ 2.37
CPNE1-205ENST00000401607 TROAPQ12815 778 aa29.87■■■□□ 2.37
CPNE1-205ENST00000401607 OTUD7BQ6GQQ9 843 aa29.87■■■□□ 2.37
CPNE1-205ENST00000401607 SERPINA10Q9UK55 444 aa29.87■■■□□ 2.37
CPNE1-205ENST00000401607 CCDC196A0A1B0GTZ2 297 aa29.86■■■□□ 2.37
CPNE1-205ENST00000401607 GADD45BO75293 160 aaPredicted RBP29.86■■■□□ 2.37
CPNE1-205ENST00000401607 DDAH1O94760 285 aa29.86■■■□□ 2.37
CPNE1-205ENST00000401607 FMNL1O95466 1100 aaPredicted RBP29.86■■■□□ 2.37
CPNE1-205ENST00000401607 ZNF444Q8N0Y2 327 aaPredicted RBP29.86■■■□□ 2.37
CPNE1-205ENST00000401607 FBXO18Q8NFZ0 1043 aa29.86■■■□□ 2.37
CPNE1-205ENST00000401607 AIFM3Q96NN9 605 aa29.86■■■□□ 2.37
CPNE1-205ENST00000401607 ZNF287Q9HBT7 754 aa29.86■■■□□ 2.37
CPNE1-205ENST00000401607 PTGER2P43116 358 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 KRT85P78386 507 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 PPP2R5BQ15173 497 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 NBPF11Q86T75 865 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 RGS22Q8NE09 1264 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 OSBPL5Q9H0X9 879 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-205ENST00000401607 GJB4Q9NTQ9 266 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 TCP11L1Q9NUJ3 509 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 PPP1R1BQ9UD71 204 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-205ENST00000401607 SSRP1Q08945 709 aaKnown RBP29.85■■■□□ 2.37
CPNE1-205ENST00000401607 NFIAQ12857 509 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 ALG1Q9BT22 464 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 SLC26A6Q9BXS9 759 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 CD2APQ9Y5K6 639 aa29.85■■■□□ 2.37
CPNE1-205ENST00000401607 MYH15Q9Y2K3 1946 aa29.84■■■□□ 2.37
CPNE1-205ENST00000401607 FER1L6Q2WGJ9 1857 aa29.84■■■□□ 2.37
CPNE1-205ENST00000401607 TSPY3P0CV98 308 aa29.84■■■□□ 2.37
CPNE1-205ENST00000401607 TSPY8P0CW00 308 aa29.84■■■□□ 2.37
CPNE1-205ENST00000401607 GABPAQ06546 454 aa29.84■■■□□ 2.37
CPNE1-205ENST00000401607 ANKS1AQ92625 1134 aa29.84■■■□□ 2.37
CPNE1-205ENST00000401607 UBE2Q2LH0YL09 131 aa29.83■■■□□ 2.37
CPNE1-205ENST00000401607 MBD3O95983 291 aa29.83■■■□□ 2.37
CPNE1-205ENST00000401607 CALM1P0DP23 149 aa29.83■■■□□ 2.37
CPNE1-205ENST00000401607 CALM2P0DP24 149 aa29.83■■■□□ 2.37
CPNE1-205ENST00000401607 CALM3P0DP25 149 aa29.83■■■□□ 2.37
CPNE1-205ENST00000401607 TTC6Q86TZ1 520 aa29.83■■■□□ 2.37
CPNE1-205ENST00000401607 DGKHQ86XP1 1220 aa29.83■■■□□ 2.37
CPNE1-205ENST00000401607 RBM5P52756 815 aaKnown RBP eCLIP29.82■■■□□ 2.362e-6■■■□□ 15.7
CPNE1-205ENST00000401607 RSBN1LQ6PCB5 846 aaPredicted RBP29.82■■■□□ 2.36
CPNE1-205ENST00000401607 CMTR1Q8N1G2 835 aaKnown RBP29.82■■■□□ 2.36
CPNE1-205ENST00000401607 CRACR2BQ8N4Y2 399 aaPredicted RBP29.82■■■□□ 2.36
CPNE1-205ENST00000401607 MYO3BQ8WXR4 1341 aa29.82■■■□□ 2.36
CPNE1-205ENST00000401607 PSMD14O00487 310 aa29.82■■■□□ 2.36
CPNE1-205ENST00000401607 RAD17O75943 681 aa29.82■■■□□ 2.36
CPNE1-205ENST00000401607 VIL1P09327 827 aaKnown RBP29.82■■■□□ 2.36
CPNE1-205ENST00000401607 CSPP1Q1MSJ5 1256 aa29.82■■■□□ 2.36
CPNE1-205ENST00000401607 DEKP35659 375 aaKnown RBP29.81■■■□□ 2.36
CPNE1-205ENST00000401607 CCDC178Q5BJE1 867 aa29.81■■■□□ 2.36
CPNE1-205ENST00000401607 KLHL34Q8N239 644 aa29.81■■■□□ 2.36
CPNE1-205ENST00000401607 NEDD1Q8NHV4 660 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 GMLQ99445 158 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 IDI2Q9BXS1 227 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 RBM28Q9NW13 759 aaKnown RBP29.8■■■□□ 2.36
CPNE1-205ENST00000401607 TFIP11Q9UBB9 837 aaKnown RBP29.8■■■□□ 2.36
CPNE1-205ENST00000401607 GUCY1A2P33402 732 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 CACNB3P54284 484 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 FUT2Q10981 343 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 CFAP100Q494V2 611 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 CAVIN1Q6NZI2 390 aaKnown RBP29.8■■■□□ 2.36
CPNE1-205ENST00000401607 NIM1KQ8IY84 436 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 ZNRF3Q9ULT6 936 aa29.8■■■□□ 2.36
CPNE1-205ENST00000401607 ZFPM1Q8IX07 1006 aa29.79■■■□□ 2.36
CPNE1-205ENST00000401607 TRIM22Q8IYM9 498 aa29.79■■■□□ 2.36
CPNE1-205ENST00000401607 CCDC82Q8N4S0 544 aa29.79■■■□□ 2.36
CPNE1-205ENST00000401607 TAOK3Q9H2K8 898 aa29.79■■■□□ 2.36
CPNE1-205ENST00000401607 PLEKHA8P1O95397 391 aa29.78■■■□□ 2.36
CPNE1-205ENST00000401607 UBE2HP62256 183 aa29.78■■■□□ 2.36
CPNE1-205ENST00000401607 KRT40Q6A162 431 aa29.78■■■□□ 2.36
CPNE1-205ENST00000401607 KAT14Q9H8E8 782 aa29.78■■■□□ 2.36
CPNE1-205ENST00000401607 FAM198AQ9UFP1 575 aa29.78■■■□□ 2.36
CPNE1-205ENST00000401607 ELP1O95163 1332 aa29.78■■■□□ 2.36
CPNE1-205ENST00000401607 NFKBIEO00221 500 aa29.77■■■□□ 2.36
CPNE1-205ENST00000401607 WASF1Q92558 559 aa29.77■■■□□ 2.36
CPNE1-205ENST00000401607 SCAND2PQ9GZW5 306 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-205ENST00000401607 RBM27Q9P2N5 1060 aaKnown RBP29.77■■■□□ 2.36
CPNE1-205ENST00000401607 SIPA1L1O43166 1804 aa29.77■■■□□ 2.36
CPNE1-205ENST00000401607 DEXIO95424 95 aa29.77■■■□□ 2.36
CPNE1-205ENST00000401607 KIF23Q02241 960 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-205ENST00000401607 TMTC3Q6ZXV5 915 aa29.77■■■□□ 2.36
CPNE1-205ENST00000401607 RNF26Q9BY78 433 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-205ENST00000401607 SERPINB13Q9UIV8 391 aa29.77■■■□□ 2.36
CPNE1-205ENST00000401607 PLIN4Q96Q06 1357 aa29.76■■■□□ 2.35
CPNE1-205ENST00000401607 KIF28PB7ZC32 967 aa29.76■■■□□ 2.35
CPNE1-205ENST00000401607 NPM3O75607 178 aaKnown RBP29.76■■■□□ 2.35
CPNE1-205ENST00000401607 PNMA1Q8ND90 353 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms