RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 DLEC1Q9Y238 1755 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 NPHP1O15259 732 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 TM4SF1P30408 202 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 NLRP12P59046 1061 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 TPM4P67936 248 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 MECOMQ03112 1051 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 GRAPQ13588 217 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 GRAPLQ8TC17 118 aaPredicted RBP12.39□□□□□ -0.43
LINC00649-202ENST00000400353 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 TTC12Q9H892 705 aaPredicted RBP12.39□□□□□ -0.43
LINC00649-202ENST00000400353 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 LAMB1P07942 1786 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 NEMFO60524 1076 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 SYKP43405 635 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 GSTO1P78417 241 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 IFIT1BQ5T764 474 aaKnown RBP12.39□□□□□ -0.43
LINC00649-202ENST00000400353 RESP18Q5W5W9 173 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 CTR9Q6PD62 1173 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 C15orf52Q6ZUT6 534 aaKnown RBP12.39□□□□□ -0.43
LINC00649-202ENST00000400353 SPC24Q8NBT2 197 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 NUP133Q8WUM0 1156 aa12.39□□□□□ -0.43
LINC00649-202ENST00000400353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC00649-202ENST00000400353 BRWD3Q6RI45 1802 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 WDHD1O75717 1129 aaPredicted RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 CERS3Q8IU89 383 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 KRI1Q8N9T8 703 aaKnown RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 HOOK1Q9UJC3 728 aaKnown RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 IRS2Q9Y4H2 1338 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 TAF1P21675 1872 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 PDE4BQ07343 736 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 DHX8Q14562 1220 aaKnown RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 CCDC178Q5BJE1 867 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 DHX40Q8IX18 779 aaKnown RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
LINC00649-202ENST00000400353 KIAA1524Q8TCG1 905 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 ZNF384Q8TF68 577 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 PRDM10Q9NQV6 1147 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 CLIP2Q9UDT6 1046 aa12.38□□□□□ -0.43
LINC00649-202ENST00000400353 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 TNRC6CQ9HCJ0 1690 aaKnown RBP12.37□□□□□ -0.43
LINC00649-202ENST00000400353 XDHP47989 1333 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 MARCKSP29966 332 aaPredicted RBP12.37□□□□□ -0.43
LINC00649-202ENST00000400353 CHAF1AQ13111 956 aaPredicted RBP12.37□□□□□ -0.43
LINC00649-202ENST00000400353 ZNF804AQ7Z570 1209 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 DZIP1Q86YF9 867 aaKnown RBP12.37□□□□□ -0.43
LINC00649-202ENST00000400353 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
LINC00649-202ENST00000400353 KCNF1Q9H3M0 494 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 BRMS1Q9HCU9 246 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
LINC00649-202ENST00000400353 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
LINC00649-202ENST00000400353 MROH7-TTC4A0A0A0MT08 1334 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
LINC00649-202ENST00000400353 USP17L12C9JPN9 530 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 USP17L21D6R901 530 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 CLGNO14967 610 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 CLSTN1O94985 981 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 BMP15O95972 392 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 LDHCP07864 332 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 KLRK1P26718 216 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 TUBE1Q9UJT0 475 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 BTBD18B2RXH4 712 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 MYO1BO43795 1136 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 PTGS1P23219 599 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 NFIXQ14938 502 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 DNTTIP2Q5QJE6 756 aaKnown RBP12.36□□□□□ -0.43
LINC00649-202ENST00000400353 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 STK11IPQ8N1F8 1099 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 PRIMPOLQ96LW4 560 aa12.36□□□□□ -0.43
LINC00649-202ENST00000400353 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00649-202ENST00000400353 LDHBP07195 334 aaKnown RBP12.35□□□□□ -0.43
LINC00649-202ENST00000400353 PTPREP23469 700 aa12.35□□□□□ -0.43
LINC00649-202ENST00000400353 KRT2P35908 639 aa12.35□□□□□ -0.43
LINC00649-202ENST00000400353 ST5P78524 1137 aa12.35□□□□□ -0.43
LINC00649-202ENST00000400353 SMIM5Q71RC9 77 aa12.35□□□□□ -0.43
LINC00649-202ENST00000400353 CTCFLQ8NI51 663 aaPredicted RBP12.35□□□□□ -0.43
LINC00649-202ENST00000400353 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
LINC00649-202ENST00000400353 IKBKBO14920 756 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 BAG3O95817 575 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 ATP2B4P23634 1241 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 PRDX5P30044 214 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 FUT2Q10981 343 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 TMTC3Q6ZXV5 915 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 MPNDQ8N594 471 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 CCDC34Q96HJ3 373 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 KCNH3Q9ULD8 1083 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms