RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 LSG1Q9H089 658 aaKnown RBP8.96□□□□□ -0.98
USP16-204ENST00000399976 MCM9Q9NXL9 1143 aa8.96□□□□□ -0.98
USP16-204ENST00000399976 POLR3DP05423 398 aaPredicted RBP8.95□□□□□ -0.98
USP16-204ENST00000399976 GTF2A2P52657 109 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 DEFB115Q30KQ5 88 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 SPRYD7Q5W111 196 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 NYAP2Q9P242 653 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 PLA2G6O60733 806 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 ZNF589Q86UQ0 364 aaPredicted RBP8.95□□□□□ -0.98
USP16-204ENST00000399976 DNAJC5GQ8N7S2 189 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 TTC14Q96N46 770 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 KRT23Q9C075 422 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 AFG3L2Q9Y4W6 797 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 NID2Q14112 1375 aa8.95□□□□□ -0.98
USP16-204ENST00000399976 A0A0G2JLL6 359 aaPredicted RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 USP17L12C9JPN9 530 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 USP17L21D6R901 530 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 FGAP02671 866 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 PTPRAP18433 802 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 TDO2P48775 406 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 CDK8P49336 464 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 RCAN1P53805 252 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 USP14P54578 494 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 VGLL4Q14135 290 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 KRT32Q14532 448 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 IMMTQ16891 758 aaKnown RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 LBX2Q6XYB7 198 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 PRRT2Q7Z6L0 340 aaPredicted RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 SDR42E1Q8WUS8 393 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 TRIM34Q9BYJ4 488 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 KIAA1683Q9H0B3 1180 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 ZBTB21Q9ULJ3 1066 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 ANGEL1Q9UNK9 670 aaKnown RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 HUNKP57058 714 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 ANAPC15P60006 121 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 PICALMQ13492 652 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 NECTIN1Q15223 517 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 AKNAD1Q5T1N1 836 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 RNF20Q5VTR2 975 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 FASTKD5Q7L8L6 764 aaKnown RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 TEX2Q8IWB9 1127 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 CRACR2BQ8N4Y2 399 aaPredicted RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 LPAR1Q92633 364 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 WRNIP1Q96S55 665 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 MAP3K14Q99558 947 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 PICK1Q9NRD5 415 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 WDR33Q9C0J8 1336 aaKnown RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 IRF6O14896 467 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 CETPP11597 493 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 PLCD1P51178 756 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 CACNB3P54284 484 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 CWC27Q6UX04 472 aaKnown RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 GMCL1P1Q8NEA9 526 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 SEC62Q99442 399 aaKnown RBP8.94□□□□□ -0.98
USP16-204ENST00000399976 KANSL2Q9H9L4 492 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 CABP5Q9NP86 173 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 PALD1Q9ULE6 856 aa8.94□□□□□ -0.98
USP16-204ENST00000399976 PRKAB2O43741 272 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 RASA1P20936 1047 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 TCP10Q12799 353 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 SNAPC2Q13487 334 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 CERKLQ49MI3 558 aaPredicted RBP8.93□□□□□ -0.98
USP16-204ENST00000399976 KIAA1211Q6ZU35 1233 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP16-204ENST00000399976 SLC10A4Q96EP9 437 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 HMGB1P09429 215 aaKnown RBP8.93□□□□□ -0.98
USP16-204ENST00000399976 FDX1P10109 184 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 HOXA7P31268 230 aaPredicted RBP8.93□□□□□ -0.98
USP16-204ENST00000399976 MAP2K1Q02750 393 aaPredicted RBP8.93□□□□□ -0.98
USP16-204ENST00000399976 PABPC4Q13310 644 aaKnown RBP eCLIP8.93□□□□□ -0.982e-11■■■■■ 76.6
USP16-204ENST00000399976 ABCB5Q2M3G0 1257 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 ZSCAN29Q8IWY8 852 aaPredicted RBP8.93□□□□□ -0.98
USP16-204ENST00000399976 MS4A4AQ96JQ5 239 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 TM6SF1Q9BZW5 370 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 ALDH8A1Q9H2A2 487 aaPredicted RBP8.93□□□□□ -0.98
USP16-204ENST00000399976 PNMA2Q9UL42 364 aa8.93□□□□□ -0.98
USP16-204ENST00000399976 ADGRA2Q96PE1 1338 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 USP17L2Q6R6M4 530 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 CAPNS2Q96L46 248 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 COL11A1P12107 1806 aaPredicted RBP8.92□□□□□ -0.98
USP16-204ENST00000399976 ZNF213O14771 459 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 HSPA4P34932 840 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 MOGSQ13724 837 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 OTUD7BQ6GQQ9 843 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 DGKHQ86XP1 1220 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 ZNF280CQ8ND82 737 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 NBPF3Q9H094 633 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 TMX2Q9Y320 296 aa8.92□□□□□ -0.98
USP16-204ENST00000399976 GUCY1A2P33402 732 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 CDAN1Q8IWY9 1227 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 ESR2Q92731 530 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 ARHGEF10LQ9HCE6 1279 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 ZNF157P51786 506 aaPredicted RBP8.91□□□□□ -0.98
USP16-204ENST00000399976 MFSD6Q6ZSS7 791 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 OPTNQ96CV9 577 aa8.91□□□□□ -0.98
USP16-204ENST00000399976 ABT1Q9ULW3 272 aaKnown RBP8.91□□□□□ -0.98
USP16-204ENST00000399976 CHGBP05060 677 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms