RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 SOS1Q07889 1333 aaPredicted RBP15.47■□□□□ 0.07
CACNA1C-211ENST00000399617 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
CACNA1C-211ENST00000399617 ITKQ08881 620 aa15.47■□□□□ 0.07
CACNA1C-211ENST00000399617 IFT81Q8WYA0 676 aa15.47■□□□□ 0.07
CACNA1C-211ENST00000399617 ARHGAP45Q92619 1136 aa15.47■□□□□ 0.07
CACNA1C-211ENST00000399617 APPBP2Q92624 585 aa15.47■□□□□ 0.07
CACNA1C-211ENST00000399617 AKT3Q9Y243 479 aa15.47■□□□□ 0.07
CACNA1C-211ENST00000399617 YEATS2Q9ULM3 1422 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 GAS7O60861 476 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 CYLC1P35663 651 aaPredicted RBP15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 CYP2J2P51589 502 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 DYNLL1P63167 89 aaKnown RBP15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 TAB3Q8N5C8 712 aaPredicted RBP15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 NOC4LQ9BVI4 516 aaKnown RBP15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 SMCO2A6NFE2 343 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 ZBED2Q9BTP6 218 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 HERC4Q5GLZ8 1057 aaPredicted RBP15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 KIF9Q9HAQ2 790 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
CACNA1C-211ENST00000399617 CRCPO75575 148 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 TNFAIP3P21580 790 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 TSTA3Q13630 321 aaPredicted RBP15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 XKR9Q5GH70 373 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 CDAN1Q8IWY9 1227 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 ZNF710Q8N1W2 664 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 ZSCAN23Q3MJ62 389 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 TICAM2Q86XR7 235 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 ABI1Q8IZP0 508 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 PARP2Q9UGN5 583 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 PALD1Q9ULE6 856 aa15.46■□□□□ 0.06
CACNA1C-211ENST00000399617 PRAG1Q86YV5 1406 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 MARK3P27448 753 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 LRWD1Q9UFC0 647 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 ZNF804BA4D1E1 1349 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 ADORA1P30542 326 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 KCTD2Q14681 263 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 MAP9Q49MG5 647 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 BEND3Q5T5X7 828 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 DNM3Q9UQ16 869 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 PLEKHM2Q8IWE5 1019 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 RIOK1Q9BRS2 568 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 GBP3Q9H0R5 595 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 AP5M1Q9H0R1 490 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 V9GYY5 206 aaPredicted RBP15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 EXOC3O60645 756 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 SCYL2Q6P3W7 929 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 SELENOOQ9BVL4 669 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 FTOQ9C0B1 505 aaKnown RBP eCLIP15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 PFDN4Q9NQP4 134 aa15.45■□□□□ 0.06
CACNA1C-211ENST00000399617 TLDC2A0PJX2 215 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 MYL3P08590 195 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 TBC1D22AQ8WUA7 517 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 TTC38Q5R3I4 469 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 SHTN1A0MZ66 631 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 TECP42680 631 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 CCDC42Q96M95 316 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 POLR2DO15514 142 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 SPOPO43791 374 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 NR1I2O75469 434 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 SYT1P21579 422 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 CHURC1Q8WUH1 139 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 ANGEL1Q9UNK9 670 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 BICDL2A1A5D9 508 aa15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 RNASELQ05823 741 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 PABPC4Q13310 644 aaKnown RBP eCLIP15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 NONOQ15233 471 aaKnown RBP eCLIP15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-211ENST00000399617 DEXIO95424 95 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 ZNF277Q9NRM2 450 aaPredicted RBP15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 TMEM2Q9UHN6 1383 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 CAPN15O75808 1086 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 RPS6KB1P23443 525 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 GAS8O95995 478 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 HAUS3Q68CZ6 603 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 SF3A3Q12874 501 aaKnown RBP eCLIP15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 PLVAPQ9BX97 442 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 CALUO43852 315 aaPredicted RBP15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 POLR2MP0CAP2 368 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 LRRIQ4A6NIV6 560 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 COBLO75128 1261 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 FAM204AQ9H8W3 233 aa15.43■□□□□ 0.06
CACNA1C-211ENST00000399617 GOLGA6L9A6NEM1 432 aa15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 CCDC175P0C221 793 aa15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 HDAC1Q13547 482 aaPredicted RBP15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 GNPTABQ3T906 1256 aa15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 DNAJC21Q5F1R6 531 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 ZBTB33Q86T24 672 aa15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 DIS3L2Q8IYB7 885 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 PDCL2Q8N4E4 241 aa15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 IQUBQ8NA54 791 aa15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 IL17REQ8NFR9 667 aa15.42■□□□□ 0.06
CACNA1C-211ENST00000399617 CARD10Q9BWT7 1032 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms